Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5353g00007 ATGGAGACGCAGCGAATTATCGAATTTCCGCATCAAAACATGGACAAGCGCCCCCGGAAGAGACCTCGTTTAACATGGGATATGCCCCCTGCTATTCCTCCAGCTTCCAAGCCTCTTCCGCCTTTATATTGCAGCCAGGAACTTGCGAATGGAGTAGTTCCGAATCATGTATATTCTTCCGTCATCTACAGGGGAGTGCCTCGCAATGGATCACCCCCTTGGAGACCTGACGATAAAGATGGGCACTACGTTTTTGCCGTTGGTGAAAATCTAACGTCACGATACAGAATTCTCAGTAAAATGGGTGAAGGGACATTCGGCCAAGTCTTGGAATGCCTTGACAATGAAAAGGAAGAAGTTGTGGCAATCAAAGTTATTCGTTCCATACACAAGTATCGTGAGGCTGCAATGATTGAAATTGATGTTCTGCAGAGGCTTGCCAGGCATGACATTGGCAATGCACGTTGTGTGCAAATACGGAATTGGTTTGACTATCGTAATCATATTTGTATTGTATTTGAGAAGCTTGGGCCAAGCTTATACGATTTTCTCCGCAAAAACAGCTATCGTTCTTTTCCCATTGATCTTGTTCGGGAGTTTGGCAGACAACTTTTGGAGTCTGTAGCATTTATGCATGATTTACGATTGATTCACACTGATTTGAAGCCAGAGAATATTCTTCTTGTCTCATCAGACTATATTAAAGTTCCAGACTACAAGTTTGTAGCTCGAACTACAAAAGATGGCTCCTATTTCAAGAACTTGCCCAAGTCAAGTTGCATAAAACTCATTGATTTTGGGAGTACAACATTTGAACATCAGGATCACAGTTATGTGGTGTCAACCAGACACTATCGAGCACCAGAGGTTATCTTAGGTCTTGGGTGGAATTATCCCTGCGATCTCTGGAGTGTTGGTTGTATACTGGTTGAACTCTGCTCTGGTGAAGCCCTTTTTCAAACTCATGAAAACTTGGAGCATCTTGCAATGATGGAGAGAGTTTTGGGGCCACTACCTCCACATATGGTGGTTAGGGCTGACCGTCGAGCTGACAAATATTTTAGAAGGAATGCACGTTTGTGTTGGCCTGATGGTTCAACTTCAAGAGAAAGCATGAGGGCTGTTTGGAAATTGCCTCGCTTGCCGGAGTGTGCGAGAGATGGCTTATGTTAG 1173 0.4408 METQRIIEFPHQNMDKRPRKRPRLTWDMPPAIPPASKPLPPLYCSQELANGVVPNHVYSSVIYRGVPRNGSPPWRPDDKDGHYVFAVGENLTSRYRILSKMGEGTFGQVLECLDNEKEEVVAIKVIRSIHKYREAAMIEIDVLQRLARHDIGNARCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREFGRQLLESVAFMHDLRLIHTDLKPENILLVSSDYIKVPDYKFVARTTKDGSYFKNLPKSSCIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVVRADRRADKYFRRNARLCWPDGSTSRESMRAVWKLPRLPECARDGLC 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5353g00007 390 CDD PKc_CLK 82 380 - -
Pral5353g00007 390 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 2 384 - -
Pral5353g00007 390 FunFam Serine/threonine-protein kinase AFC2 82 175 - -
Pral5353g00007 390 Gene3D Phosphorylase Kinase; domain 1 82 175 - -
Pral5353g00007 390 ProSiteProfiles Protein kinase domain profile. 95 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5353g00007 390 Pfam Protein kinase domain 95 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5353g00007 390 FunFam Serine/threonine-protein kinase AFC2 171 387 - -
Pral5353g00007 390 SUPERFAMILY Protein kinase-like (PK-like) 82 366 IPR011009 -
Pral5353g00007 390 SMART serkin_6 95 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5353g00007 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Pral5353g00007 390 Gene3D Transferase(Phosphotransferase) domain 1 149 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5353g00007 Pral-Chr5353 42537 46313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5353g00007 92 359 MAP Kinase Gene Family AT3G18040 30.325 2.19e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Pral5353g00007 Pkinase 3.3e-42 CL0016