Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5353g00004 ATGGAGAACCAGAAACCCAGTTGGTTTGAAAGAGCGAAGCCATTCATAGCTGTGGTGTTCTTGCAGACTGGGTTTGCAGGCATGGATGTTCTATCCAAGGCTGCATTGAACAAGGGGATGAGCAATTACGTGCTTGTCGTCTACCGCCATGCTGTCGCCTTTTTGGTCATCGCCCCTTTTGCAGTCATCCTGGACAAGAAAGTTAGGCCAAAGATGACATTTTCAATCTTCATGAAGATACTGGCGCTCAGTGTGCTAGAACCAGTTATTGACCAAAATTTATACTTTCTGGGAATGAAATATACGACAGCAACGTTTGCCGCTGCAATGACTAATATCCTTCCCGCCATCACCTTCGTCATGGCTTGCATTCTTAGGCTTGAGAAGTTGAAAATGAGAAGCATACGCAGCCAAGCCAAGGTGTTTGGGACTCTAGCAACTGTTGCTGGAGCGATGGTCATGACATTGATGAAAGGTCCGGTGCTTGAGTTATTTGGAACACATGGAAGCAATAACAGCAATCATAGTGACACGGCAAATCTTCAACATGCAATAAAGGGATCAGTGATGATCACGATAGGCTGCTTCAGCTGGGCTTGTTTCATGATCCTCCAAGCTATTACTCTTGAAACCTACCCAGCTGAGCTCTCTCTTACAGCATGGATATGCCTGTTGGGATCAGTTGAAGGTGCCGCAGTTGCCCTGGTTATGAAAAGGGGCAACGCTTCGATTTGGTCTTTAAATTGGGATACAAAACTGCTGGCCGCTGTCTACAGTGGCGTAGTCTGCTCAGGAATGGCTTATTACATCCAAGGGGTTGTGATGAAAACTAGAGGCCCAGTATTTGTTACCGCGTTTAGTCCCCTCTGCATGGTAATTGTGGCTATCATGGGCTCCATCATTTTAGCTGAGCAATTGTACCTTGGAAGGGTAATCGGTGCCATTGTCATTGTTTTGGGTTTGTACCTTGTGGTATGGGGTAAAAGCAAAGACTACGACCCACCAACTCCAATTCCCAAGGAGCATCTACTGCCAGACAAGTTCAGTTCAGGTGAGGGAAATGCCCCAACCGAGCATTCCAATCATGAGGTCATCACTATCACCAATTTTGAAGCAGGAATCACTCGAGAGGAACAAGTGTGA 1143 0.4637 MENQKPSWFERAKPFIAVVFLQTGFAGMDVLSKAALNKGMSNYVLVVYRHAVAFLVIAPFAVILDKKVRPKMTFSIFMKILALSVLEPVIDQNLYFLGMKYTTATFAAAMTNILPAITFVMACILRLEKLKMRSIRSQAKVFGTLATVAGAMVMTLMKGPVLELFGTHGSNNSNHSDTANLQHAIKGSVMITIGCFSWACFMILQAITLETYPAELSLTAWICLLGSVEGAAVALVMKRGNASIWSLNWDTKLLAAVYSGVVCSGMAYYIQGVVMKTRGPVFVTAFSPLCMVIVAIMGSIILAEQLYLGRVIGAIVIVLGLYLVVWGKSKDYDPPTPIPKEHLLPDKFSSGEGNAPTEHSNHEVITITNFEAGITREEQV 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5353g00004 380 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020
Pral5353g00004 380 Pfam EamA-like transporter family 24 154 IPR000620 GO:0016020
Pral5353g00004 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 330 - -
Pral5353g00004 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Pral5353g00004 380 PANTHER WAT1-RELATED PROTEIN 13 332 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5353g00004 Pral-Chr5353 15848 18578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5353g00004 2 369 Nodulin-like Gene Family AT2G37460 66.757 2.01e-179 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5353g00004 - - pcin:129305629 657.136