Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5352g00018 ATGTCAACCCAGAATCGGCGTCCATCGTTTTCCTCCTCGACGACGTCGTCTATGGCAAAGCGGCGCGCGTCGTCATCGGAGAATGCGGGGAAGGCTATGGCAGCCCCTCCACACTTGGTCAAGAAGCGAGCGCCTCTCAGTAACCTGACCAATCAAAACAATGCGTCTCACAGTGCTTTGCGAAAGTCACTGCCGTCATCTACTTTGGTACCGTGCACAACTAAAATTACTCAGACAAAGAAGAAATTCCCTGCTTGCACCACAAGCTCAGCCATTTCCAGGAATAAAATTCCTACTTCGTTAAATGCTAAATCGACTGCAGTTGTTTTCCCCAAGGCCACTTCTTTTCCGCAAAGGGATGGACGTAATTCTGCCACTGTTGCTCTCCCTTGCAGAATGGATACTTCTCCTGTCAAATCAGACAGGATGTCAGTTTCTCTGGACGAGACGATGTCTACCTGTGATTCTTTCAAGAGCCATGAAATTGAATATATTGACAACAGCGATATTTCAGCCCTTGATTCTACTGATAGAAGGACATTCAGCAATCTGAACATCTCAGATAATACGGAGGCGCCAGTTAATGTTTGCAGCAGAGACACACTTGTTGACTTGGAAAGAGATGGCAAATTTGTCAATATCGACGACAACTACTTGGATCCTCAGCTTTGTGCACCTTATGCATGTGATATCTACAAGCATTTGCGTGCGTCCGAGGGAAAGAAAAGGCCTTCCACAGACTTCATGGAGAGAATTCAGAAGGACATAAATTCCAACATGCGTGCCATATTAGTTGACTGGCTCGTCGAGGTGGCTGAAGAGTATAGGCTTGTACCTGATACATTGTATTTGACAGTCAACTACATAGATCGGTATCTTTCAGGGAATGTGATGAGTAGGCAAAAGTTACAATTACTTGGTGTTGCCTGCATGATGATTGCCGCTAAGTACGAGGAGATTTGTGCCCCTCAGGTGGAGGAATATTGTTATATAACTGATAACACGTACTTCAAAGAAGAGGTTTTGCAAATGGAATCCGCTGTCTTAAATTATCTAAGGTTTGAAATGACAGCTCCGACAATAAAATGTTTCTTAAGACAATTTGTTCGCGCAGCTCAAGGAGTCAACGAGGTGGCATCATTACAATTGGAGTGCCTGACCAACTATATTGCTGAATTGTCTTTACTGGAGTATACAATGCTCTGTTATGCCCCATCACTTATAGCTGCTTCTGCAATCTTCCTGGCTAAATTCATTCTTTTCCCTTCAAAGAAACCATGGAATTCTACATTGCAGCATTACACACTCTACAAGGCTTCTGATTTGCGTAACTGTGTGAAGGATCTCCATCGTCTATGTTATAACAGCCATAGTTCTGGCTTGCCTGCAATCCGGGAGAAATACAGTCAACACAAGTACAAATATGTGGCAAAGAAGTCGTGTCCTCCATCAATCCCTCAAGAACTTTTCCAAAGTTGA 1479 0.4388 MSTQNRRPSFSSSTTSSMAKRRASSSENAGKAMAAPPHLVKKRAPLSNLTNQNNASHSALRKSLPSSTLVPCTTKITQTKKKFPACTTSSAISRNKIPTSLNAKSTAVVFPKATSFPQRDGRNSATVALPCRMDTSPVKSDRMSVSLDETMSTCDSFKSHEIEYIDNSDISALDSTDRRTFSNLNISDNTEAPVNVCSRDTLVDLERDGKFVNIDDNYLDPQLCAPYACDIYKHLRASEGKKRPSTDFMERIQKDINSNMRAILVDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMSRQKLQLLGVACMMIAAKYEEICAPQVEEYCYITDNTYFKEEVLQMESAVLNYLRFEMTAPTIKCFLRQFVRAAQGVNEVASLQLECLTNYIAELSLLEYTMLCYAPSLIAASAIFLAKFILFPSKKPWNSTLQHYTLYKASDLRNCVKDLHRLCYNSHSSGLPAIREKYSQHKYKYVAKKSCPPSIPQELFQS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5352g00018 492 MobiDBLite consensus disorder prediction 1 37 - -
Pral5352g00018 492 SUPERFAMILY Cyclin-like 359 484 IPR036915 -
Pral5352g00018 492 Gene3D - 230 478 - -
Pral5352g00018 492 Pfam Cyclin, N-terminal domain 230 356 IPR006671 -
Pral5352g00018 492 ProSitePatterns Cyclins signature. 261 292 IPR006671 -
Pral5352g00018 492 CDD CYCLIN_AtCycA_like_rpt1 220 355 - -
Pral5352g00018 492 Pfam Cyclin, C-terminal domain 359 480 IPR004367 -
Pral5352g00018 492 SUPERFAMILY Cyclin-like 220 356 IPR036915 -
Pral5352g00018 492 FunFam Mitotic cyclin 6 244 344 - -
Pral5352g00018 492 MobiDBLite consensus disorder prediction 1 24 - -
Pral5352g00018 492 SMART Cyclin_C_2 359 482 IPR004367 -
Pral5352g00018 492 SMART cyclin_7 363 451 IPR013763 -
Pral5352g00018 492 SMART cyclin_7 266 350 IPR013763 -
Pral5352g00018 492 CDD CYCLIN_AtCycA-like_rpt2 359 473 - -
Pral5352g00018 492 Gene3D - 244 357 - -
Pral5352g00018 492 FunFam Cyclin A1 346 478 - -
Pral5352g00018 492 PANTHER CYCLINS 169 470 IPR039361 -
Pral5352g00018 492 PIRSF Cyclin_A_B_D_E 1 491 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5352g00018 Pral-Chr5352 83975 87508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5352g00018 4 490 Core Cell Cycle Gene Families AT1G44110 62.857 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5352g00018 K06627 - qsa:O6P43_019780 719.153