Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5352g00014 ATGGGAAGCCCACAGCAGCATCTTGAAGCTGCCAATCACAAAGCAGTCTTGAAGGCATCTCTTCCATTATCTACCCTAAATGCTGAGTCAAATCACCAGGAACCACCAGCGTGGAGGAAGTTCCTGGCATTTGTAGGTCCGGGTTTCTTGGTCTCTTTGGCTTACCTTGATCCTGGAAACCTGGAAACTGATCTCCAAGCCGGAGCCAACCACAGATATGAGCTGCTGTGGGTGATTTTTATTGGACTCATCTTTGCTCTCATTATTCAGTCGTTGGCCGCAAACCTCGGCGTAAGCACTGGCAAACACCTTTCGGAATTATGTAAAGCGGAGTATCCCTTGTTGGTCAAGTATTGCTTATGGTTGTTAGCCGAGTCTGCCGTCATAGCCGCTGACATCCCCGAAGTAATTGGCACCGCCTTTGCTCTCAACATCCTCTTCCACATCCCACTATGGGCCGGAGTTCTGTTAACTGGTTTCAGCACTCTCTTGCTCCTGGGTCTGCAGACATTTGGGGTGAGGAAGCTGGAAATGGTGATATCAATGCTAGTGTTTATAATGGCGGGATGTTTCTGGGGAGAAATGAGCTACGTAAAGCCAGCAGCTTCTGATGTAGTGAAAGGCATGCTTGTGCCCAAACTCAGTGGTCATTCAGCCACAGCCGACGCTATTGCCCTTCTAGGTGCTCTTGTTATGCCCCACAACATCTTCCTTCATTCTGCTCTTGTGCTTTCTAGACAAGTACCCTCTACAGTGCGTGGCGTTAATGATGCATGTAGATACTTTCTGATAGAGAGTGGAATTGCACTCCTTATAGCGTTTCTAATCAATGTGGCAGTAATTTCCGTATCTGGCACTGTTTGTTCCGCCCCTGACATTTCTGAGGAAAATGCAGATCGTTGCAGCGATCTTACTCTTAACTCTGCTTCTTTCCTCCTCGAGAATGTTCTGGGACGGTCCAGCTCAATCATTTACGCGGTTGCGCTACTTGCCTCTGGCCAAAGCTCTACTATTACTGGCACATATGCTGGGCAATACATTATGCAGGGTTTCTTGGACCTCAAGATGAAAAAATGGATTAGGAATTTGGTCACTAGGTCTATTGCAATAACTCCTAGTCTTATTGTCTCCATTATTGGTGGATCATCTGGGGCAGGACGACTTATCATCATTGCCTCGATGATACTTTCATTTGAGCTTCCATTCGCTTTGATCCCACTTCTCAAGTTTAGCAGCAGCAGCACCAAGATGGGTCCTCACAAGAATTCGATCATCATCATAGTCATGTCATGGATTCTCGGGACAGGGATAATTGGAATCAATGTGTACTACCTCATTACAGGGTTCGTGAGTTGGCTAATTCATAGCAGTCTACCTAAGGTTGCAAAAGTGTTCATTGGGATCATAGTGTTTCCTTTAATGGCAACGTACGTCATGGCGGTACTTTACCTAACCGTTAGGAAAGACACCGTAAAGACATATATTGAGACGAAGAACGACCCAGTAGTACAAACCCACATGGAAAAGGGGTTGATGAATCCTAATGGGCAATTGGAGTTGGGTCGTGTTCCCTACAGAGACGATTTAGCCGACATATCATTTCCAGAATAG 1611 0.4618 MGSPQQHLEAANHKAVLKASLPLSTLNAESNHQEPPAWRKFLAFVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVIFIGLIFALIIQSLAANLGVSTGKHLSELCKAEYPLLVKYCLWLLAESAVIAADIPEVIGTAFALNILFHIPLWAGVLLTGFSTLLLLGLQTFGVRKLEMVISMLVFIMAGCFWGEMSYVKPAASDVVKGMLVPKLSGHSATADAIALLGALVMPHNIFLHSALVLSRQVPSTVRGVNDACRYFLIESGIALLIAFLINVAVISVSGTVCSAPDISEENADRCSDLTLNSASFLLENVLGRSSSIIYAVALLASGQSSTITGTYAGQYIMQGFLDLKMKKWIRNLVTRSIAITPSLIVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSIIIIVMSWILGTGIIGINVYYLITGFVSWLIHSSLPKVAKVFIGIIVFPLMATYVMAVLYLTVRKDTVKTYIETKNDPVVQTHMEKGLMNPNGQLELGRVPYRDDLADISFPE 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5352g00014 536 Pfam Natural resistance-associated macrophage protein 62 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5352g00014 536 NCBIfam Nramp family divalent metal transporter 46 412 - -
Pral5352g00014 536 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 39 415 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5352g00014 536 PRINTS Natural resistance-associated macrophage protein signature 393 412 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5352g00014 536 PRINTS Natural resistance-associated macrophage protein signature 333 352 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5352g00014 536 PRINTS Natural resistance-associated macrophage protein signature 173 194 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5352g00014 536 PRINTS Natural resistance-associated macrophage protein signature 361 378 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5352g00014 536 PRINTS Natural resistance-associated macrophage protein signature 148 167 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5352g00014 536 PRINTS Natural resistance-associated macrophage protein signature 223 246 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5352g00014 536 PRINTS Natural resistance-associated macrophage protein signature 120 146 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5352g00014 536 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 30 491 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral5352g00014 536 Hamap Divalent metal cation transporter MntH [mntH]. 25 449 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5352g00014 Pral-Chr5352 62118 65610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5352g00014 27 536 Inorganic Solute Cotransporters AT1G15960 58.869 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5352g00014 K21398 - gmx:100787785 822.772