Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5352g00010 ATGGCCGCAGCCGCACAGCTTCACTTGCCCCCCGGCTTCCGATTCCATCCCACCGACGACGAGCTCGTCTTGCACTATCTCTGCCCTAAATCTGCCTCCCGCCCCCTCTCCGTTCCCATCATCGCCGAAGTCGACCTTTACCAGTACGACCCTTGGGACCTCCCCGGCAAGGCTTTGTACGGAGAGAAGGAGTGGTACTTCTTCTCGCCCAGGAACCGCAAATATCCCAACGGTTCCAGACCAAACCGTGCCGCCGGCACTGGCTACTGGAAGGCTACCGGAGCCGATAAACCCATCGGACACCCCAAACCGGTGGGGATCAAGAAGGCTCTGGTTTTCTACGCGGGGAAAGCGCCCAAAGGAGAGAAAACCAATTGGATTATGCATGAGTATCGTCTGGCCGACGTGGATCGCTCTGCCCGCACAAACAGCACCTTAAGGCTGGATGATTGGGTGCTTTGCCGAATATACAACAAGAAGGGCATCATTGAGAAACATCCCGCTGCTGGCGGCCGTAAAATTGAGTGGTCAGGAATCGAGGACAAGAAGCCGGAAAATGTGTCTCGTGGTGTTGGTATTCCCGGCCGGCATCCTCCTCATGCTCCGTCTCCTCCCGTGACCGATTACTTGTACTTCGACAAGTCGGATTCAGTCCCGAAGCTGCACACGGAGTCGAGCGGCGGCTCCGAGCATGTGGTATCGCCGGAGTTTGCGAGCGAGGTGCAGAGCGAACCCAAGTGGAATGAATGGGAAACGAACGTTGGGTTCCCATATAATTACGCGGGCGCCACCATGAACCATGGTTTCGAGCCTCAGACTCAGTTGATGCAGAGCAATAACCAGATGTCGACGTTGCAGGATATTTTCACGTACTTTCAGAAGCCCTTCTGA 891 0.5578 MAAAAQLHLPPGFRFHPTDDELVLHYLCPKSASRPLSVPIIAEVDLYQYDPWDLPGKALYGEKEWYFFSPRNRKYPNGSRPNRAAGTGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARTNSTLRLDDWVLCRIYNKKGIIEKHPAAGGRKIEWSGIEDKKPENVSRGVGIPGRHPPHAPSPPVTDYLYFDKSDSVPKLHTESSGGSEHVVSPEFASEVQSEPKWNEWETNVGFPYNYAGATMNHGFEPQTQLMQSNNQMSTLQDIFTYFQKPF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5352g00010 296 FunFam NAC transcription factor 18 163 - -
Pral5352g00010 296 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Pral5352g00010 296 PANTHER NAC TRANSCRIPTION FACTOR 56 9 186 - -
Pral5352g00010 296 MobiDBLite consensus disorder prediction 174 207 - -
Pral5352g00010 296 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Pral5352g00010 296 Pfam No apical meristem (NAM) protein 10 133 IPR003441 GO:0003677|GO:0006355
Pral5352g00010 296 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5352g00010 Pral-Chr5352 41320 43151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5352g00010 7 296 NAC Transcription Factor Family AT1G01720 64.238 7.39e-130 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5352g00010 NAM 3.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5352g00010 - - gmx:100805768 434.491