Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5352g00003 ATGTCGTCAGAGAAGTCAAGGAAAGTGTTCGATCCAGAAGCAGCGTCTTTGCTTGTGGAGGAGCTGAGGGGCACCTTCGCTTCTGGCAGGATGCGAAGCTACGAGTGGAGAGTTTCGCAGTTGAAGGCCCTTTCTAAGTTGGTCGATGATCGTGAGCAACAGATTATCGAGGCTCTCCGCTCCGATCTCTACAAGCCCCCGCTTGAAACCGTCGCCTACGAGATTGCTATGCTGAAAAATTCATGTAAAGTTGCACTGAAAGAACTGAAACATTGGATGAAGCCGGAAAAGGTCAAAACTTCAATCGCTACTTTTCCTTCTTCAGCAGAAATAGTGTCGGAACCTCTGGGGGTTGTGTTAATCATCTCGGCATGGAATTATCCATTTTTGTTATCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATGCGGTGGTGCTTAAACCGTCAGAAATTGCTCCGGCCACATCATCGCTGATGGCAAAATTGCTAGAGGAGTACATGGATAAAGCATCTATAAAGGTCGTTGAGGGGGCAGTCGATGAAACATCTGCTCTGCTGCAGCAAAAGTGGGACAAAATTTTCTACACAGGTAATGGAAGAGTGGGACGCATAGTGATGGCTGCTGCTGCAAAACACCTTACGCCGGTTGTTCTGGAGCTTGGAGGGAAATCTCCAGTTGTTGTTGATTCAGATATCAATTTACGAGTAGCTGCTAGACGGATAATTGTGGGCAAGTGGGGTTGCAACAATGGACAAGCCTGCATTTCGCCAGATTACATTCTAACAATAAAAGACTTTGCCCCCAAGTTGATTGATGCCCTAAAGACTGAATTGGAGAAATTTTATGGAGAAAACCCATTAGAATCAAAAGATTTGTCCCGCATTGTGAATTCGAATCACTTTGCTCGCTTGACAAAGCTGTTGGAGGATGATAAGGTCGCTGGTAAGATTGTTTATGGAGGACAGAAGGATGAAAGCAAATTGAGGATTGCTCCCACTATTTTATTAGATGCTCCTCGGAATTCTTTGATAATGAAGGAGGAGATATTTGGTCCTTTACTTCCCATTATCACGGTCAATAAATTGGAAGAAAGTTTCGATGTGATTAATTCAGGAACAAAACCCCTCGCTGCATATTTATTTACCAACAACAAGAAGCTCAGGGAGCAGTTTGTGATGACCGTATCTGCAGGGGGTTTGGTTGTCAATGACACTGCCGTGCATCTCGTCAACCATACTTTGCCATTTGGAGGAGTGGGGGAGAGCGGAATGGGTTCATACCATGGGAAGTTCTCGTTTGAAGCCTTTAGCCACAAAAAAGCAGTTTTGTATCGCGGTTTCGTGGGAGATGCCTCAGTGAGGTACCCTCCGTACACTAATACAAAGCTCAGGTTGCTCAAGGCTTTGATTGGCGGCGGTATACTTGGTATAATCCGTGCCATTTTTGGATGGTCTTAA 1464 0.4515 MSSEKSRKVFDPEAASLLVEELRGTFASGRMRSYEWRVSQLKALSKLVDDREQQIIEALRSDLYKPPLETVAYEIAMLKNSCKVALKELKHWMKPEKVKTSIATFPSSAEIVSEPLGVVLIISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLMAKLLEEYMDKASIKVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSDINLRVAARRIIVGKWGCNNGQACISPDYILTIKDFAPKLIDALKTELEKFYGENPLESKDLSRIVNSNHFARLTKLLEDDKVAGKIVYGGQKDESKLRIAPTILLDAPRNSLIMKEEIFGPLLPIITVNKLEESFDVINSGTKPLAAYLFTNNKKLREQFVMTVSAGGLVVNDTAVHLVNHTLPFGGVGESGMGSYHGKFSFEAFSHKKAVLYRGFVGDASVRYPPYTNTKLRLLKALIGGGILGIIRAIFGWS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5352g00003 487 FunFam Aldehyde dehydrogenase 224 424 - -
Pral5352g00003 487 PIRSF ALDH 2 477 IPR012394 GO:0006081
Pral5352g00003 487 PANTHER ALDEHYDE DEHYDROGENASE 15 474 IPR012394 GO:0006081
Pral5352g00003 487 Pfam Aldehyde dehydrogenase family 31 444 IPR015590 GO:0016491
Pral5352g00003 487 CDD ALDH_F3FHI 15 446 - -
Pral5352g00003 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 224 424 IPR016163 GO:0016620
Pral5352g00003 487 FunFam Aldehyde dehydrogenase 23 227 - -
Pral5352g00003 487 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 220 227 IPR029510 GO:0016491
Pral5352g00003 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 442 IPR016162 GO:0016491
Pral5352g00003 487 SUPERFAMILY ALDH-like 18 459 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5352g00003 Pral-Chr5352 14571 19342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5352g00003 75 485 Aldehyde Dehydrogenase Gene Family AT1G44170 74.696 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5352g00003 K00128 - gmx:100778722 795.423