Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5352g00002 ATGGCTGCTCTCGCTTCTTCTCCTTTCATCATCCCCTCCCGCACCACACCCTCCTTCCCACTTTCTTCTTCCTCTTCTACCTCCCTCTCTTCTCTCAAATGCTTAACATCCTCTTCTCCCATTTCTCACCTCTTTTTTAATCAGGCTCAGCGAAGAGCACAGGTCCGTTTATCAAATGGAGGATATGGCACAGTGTCTGCGCCCAAATCATTCGCGTCTAATCCTGATCAGCTGAGGAGTGCAAGAGAAGACATTAGACAGCTGCTCAAGACTAAGTTCTGCCATCCAATTCTGATCCGCTTGGGATGGCATGATGCTGGTACTTACAATAAAAGTATTGAGGAGTGGCCACAAAGAGGTGGAGCTAACGGGAGCTTAAGATTTGAAATTGAACTGAAACATGCAGCCAATGCCGGGCTTGTTAATGCATTGAAACTTCTACAGCCAATCAAAGACAAGTACTCTGGTCTGACATATGCAGATTTATTTCAGCTGGCTGCTGCTACAGCTGTGGAGGAGGCGGGTGGACCAAAAATCCCTATGAAGTATGGAAGACTTGATGTCTCAGGACCTGAACAGTGTCCTGAAGAAGGCAGACTTCCTGATGCGGGCCCCCCCTCACCTGCTGATCATTTACGGCAAGTTTTTTACAGAATGGGTTTGAATGACAGGGAAATAGTTGTACTATCTGGTGCCCACACACTGGGGCGGTCTCGACCACAGCGTAGTGGCTGGGGCAAGCCAGAGACCAAGTATACGAAAGATGGACCAGGAGAACCTGGGGGGCAATCCTGGACAGTGCAATGGTTGAAGTTTGACAACTCGTACTTCAAGGACGTCAAAGAAAGAAAGGATGAAGAACTATTGGTCTTGCCAACCGATGCTGTTCTTTTTGAGGATCCGCCTTTTAAGGTCTATGCAGAGAAATATGCTGAAGATCAGGAAGCGTTCTTTAAAGATTATGCTGAAGCCCACGCCAAACTTAGCAATCTTGGAGCCAAGTTTGATCCTCCGGAGGGTATTGTCATCGATAGCGGTTCTCCAAAACCTGAGCCAGAGAAGTTTGAAGCAGCGAAATACTCGACTGGAAAGAGAGAGCTGTCAGATGCTATGAAACAGAAGATTCGGGCCGAGTACGAGGCAGTTGGCGGGAGCCCAGATAAGCCTCTACAGTCTAACTATTTTCTAAATATCATGATTATCATTGCCGTTTTGGCATTTGTGACATCGCTGCTCGGAAACTAG 1245 0.4739 MAALASSPFIIPSRTTPSFPLSSSSSTSLSSLKCLTSSSPISHLFFNQAQRRAQVRLSNGGYGTVSAPKSFASNPDQLRSAREDIRQLLKTKFCHPILIRLGWHDAGTYNKSIEEWPQRGGANGSLRFEIELKHAANAGLVNALKLLQPIKDKYSGLTYADLFQLAAATAVEEAGGPKIPMKYGRLDVSGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDREIVVLSGAHTLGRSRPQRSGWGKPETKYTKDGPGEPGGQSWTVQWLKFDNSYFKDVKERKDEELLVLPTDAVLFEDPPFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDSGSPKPEPEKFEAAKYSTGKRELSDAMKQKIRAEYEAVGGSPDKPLQSNYFLNIMIIIAVLAFVTSLLGN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5352g00002 414 Gene3D Peroxidase, domain 2 203 326 - -
Pral5352g00002 414 MobiDBLite consensus disorder prediction 190 209 - -
Pral5352g00002 414 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 81 205 - -
Pral5352g00002 414 PRINTS Plant ascorbate peroxidase signature 156 174 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral5352g00002 414 PRINTS Plant ascorbate peroxidase signature 294 318 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral5352g00002 414 PRINTS Plant ascorbate peroxidase signature 74 94 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral5352g00002 414 PRINTS Plant ascorbate peroxidase signature 95 110 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral5352g00002 414 PRINTS Plant ascorbate peroxidase signature 175 187 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral5352g00002 414 SUPERFAMILY Heme-dependent peroxidases 76 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral5352g00002 414 ProSiteProfiles Plant heme peroxidase family profile. 160 356 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5352g00002 414 Pfam Peroxidase 82 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5352g00002 414 FunFam L-ascorbate peroxidase T, chloroplastic 203 326 - -
Pral5352g00002 414 CDD ascorbate_peroxidase 66 336 - -
Pral5352g00002 414 PRINTS Haem peroxidase superfamily signature 225 240 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5352g00002 414 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5352g00002 414 PRINTS Haem peroxidase superfamily signature 175 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5352g00002 414 PRINTS Haem peroxidase superfamily signature 95 109 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5352g00002 414 PRINTS Haem peroxidase superfamily signature 157 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral5352g00002 414 Gene3D - 81 334 - -
Pral5352g00002 414 MobiDBLite consensus disorder prediction 237 264 - -
Pral5352g00002 414 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 66 336 IPR044831 GO:0004601|GO:0034599
Pral5352g00002 414 ProSitePatterns Peroxidases proximal heme-ligand signature. 225 235 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5352g00002 Pral-Chr5352 4610 9126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5352g00002 81 331 Peroxidase AT5G66390 29.492 9.37e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5352g00002 K00434 - csav:115707840 676.396