Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5352g00001 ATGCAGGGTACAAAAGTGAATATGATCATGACAGATTACTGCATGCCTGGGATGAGTGGTTATGATTTGCTTAAACGGCTCAAGGGATCTCCTTGGAAAGATATACCCGTCGTCATTATGTCATCAGAAAACGTGCCTTCAAGAATCAGCATGTGCCTGGAAGGAGGAGCAGAGGAGTTTCTCTTGAAGCCTCTTCAGTTATCAGATTTGGAGAAGCTCCAACCCTACTTCCTGAAACTACCCGACAATTCCTGCGAAGGAGAATGCATATCTACCGACAATAGCTATAATAACTGTAATAGTAAACGGAAGGCGACGTCACCGGAACCTAGGGAGAGATCAAGATCCAAGATGAAAGAATTAGAGGTTGTGTGA 375 0.44 MQGTKVNMIMTDYCMPGMSGYDLLKRLKGSPWKDIPVVIMSSENVPSRISMCLEGGAEEFLLKPLQLSDLEKLQPYFLKLPDNSCEGECISTDNSYNNCNSKRKATSPEPRERSRSKMKELEVV 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5352g00001 124 Pfam Response regulator receiver domain 3 72 IPR001789 GO:0000160
Pral5352g00001 124 ProSiteProfiles Response regulatory domain profile. 1 78 IPR001789 GO:0000160
Pral5352g00001 124 MobiDBLite consensus disorder prediction 105 124 - -
Pral5352g00001 124 SUPERFAMILY CheY-like 4 73 IPR011006 -
Pral5352g00001 124 Gene3D - 1 118 - -
Pral5352g00001 124 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 101 IPR045279 GO:0009736
Pral5352g00001 124 MobiDBLite consensus disorder prediction 94 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5352g00001 Pral-Chr5352 435 1714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5352g00001 2 98 Response Regulator Gene Family AT3G57040 59.184 7.09e-36 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral5352g00001 Response_reg 1.2e-14 CL0304