Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5351g00048 ATGGACGGCTCTACAGTGGAGCTCAGTCCAAACAATCTGGCCACACCCAAGCGCCGGAATGATCGCCGGAAGTTGGTTCAGTCGACATTGTTCCCTCAGAAAACTCAAGAGTCCGATGACAGAGCTGATGATCAACAAGAGGAAGAAGAGGCACACTGTTGTGCGAATGAGAACAAGAAGGGAAAGTCCAAACTGAAAGTTACTCCTCGAACCAAGAATTCCAAGCAAAAGGAGAAGCAGCTGCAGAATACTACGCCAAAGAAACGGTCACCCAATGGGGTTAAGGGGGCAAGCTCACGGCAAATGGTGAACGACGTGGCACAGATTAATATGGCAGTCCCTGATTTGCGTTTGGAGGCAAAACTGTCAGCTGAGGAAAATTCGAGGATGTTTGCTGGACGGCAAATACATCCCTTTTTTTCTTCATGGAAGGTTGGGAAGAAACCTCATGAGGCAGCTGAATCGGAACTCAGTTTATGTGGAGCGAGGAGGAAAGATGAGGAAGTACTTGCCCGTGCTGCTATTCATGTGTTTGAAAATAATCAGGATATCAATGATACATCATTGCCAGACTGGAAAAACTGGACTTTTTTGGGGCAGACTGCCAAAGCAAATTGCTGTCCAGAAAGTTCATTTTCCTCTGTTTTTGAGGGTTCTATTGAGCCCTTAAATATTGATAAGCTTCACAGTACTTTTTATCCCCCTGGCTGTATAGATTCTCAAAATGTCCCATCTGGTTCAGATCAACAATCTATAGAATCTACGCAGCCTCAAGTAGAAAAGTCAGCTGGACCGGCTGGAGGGCAAACAAGCCTTCAATCACTAGAAGCTGAATTGCAGGACATGAAAGCCGATACTGAGCAAGCTGGCATTTTTAGAAAGTCAGATCCTGAACCACAGAGTAGATTTCTTCAAGAGAGCATGAGGTTGTATTACCATAGTTGTGGAGATAAGGCCGAGGGAACCTTATGGACATACAAGTACAAGCCAACAAAGGCCTTTGAGGTATGTGGTAATGATGAGTCTGTGAAATTTTTGCGTGACTGGTTACAACTCTGGCATGGAAGACGTTATCAGAGAAGGAAAGATGCCTTGTATAGGGATAAAGTTGATATGCAAGGCGATGACGATGATCATGATTATGTCTGTTCTCATTATGACTATGATTCAGAAGACATGACCGAGGAGGACTCCCTGGAGAATGTCCTCTTAATTACTGGACCAATAGGGTGTGGGAAGTCTGCGGCTGTATATGCTTGTGCACAAGAGGAGGGGTTTGAGGTTCTAGAGCTCAATGCATCAGACTGTCGGAATGGGACTGCTGTCAAGCAACACTTTGGAGATGCTCTTGGATCACGTGGGTTCAAAAGGTTATTGGAACACACCAATAGTTCACCAATGAAGAAAAAGAGGAAGTTACCCTCAGGCCTGGCTTTGCCTTGTAACAAAGCATCTGATGCGTTAAATGAAGGGGTAGCTGGACCAATAGCCATATCTGATGATGAAGCTGTCTGCCCTGATGCAAGATCTTGGACATTACCCGGCCACAGAAACTTAATTGGGTATGATAAAGTCCAAACATTAATTCTAATTGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATACAACAAATTGCAGAGACAGCCAAGGGGCCAATTGTACTAACCTGCAATAGCAATAATCCTGCGCTGCCAGATAATTTTAGTAGATTGTGTGTTTCTTTCTCATTGCCATCCGCAAAGGAGTTGCTGTGCCACTTGTACATGGTTTGTGTCACAGAAGCAGTCAACATTCATCCTCTCATATTGGAGAAATTTATACAATCTTGTGGCGGTGATATCCGCAAAACCATCATGCATCTTCAGTTCTGGTTCCAGAGTAAAAGATTAAGAAAAGACAGAAAAGCACAGAAATTGTATAGCTCGCTTCCATTTGACCTTGAGGTTGGCCATCAGATACTGCCCAAGATGATGCCCTGGGATTTTCCCTCTCAGTTATCTGAACTAATTGAGAACGAAGTTACCAAGGTAATAACCACAATGGAGGAAAACTCTAGTTTGCAGAGGTCAGTTGAGAAGCAGTTTGACGTAAATGAAAAGCAAAGTGATTCAGAGGCGCAGCAGATGGGAGCTGATTGCATAGAGGCCAAAAAAGTAGAAATGCTTGAGAGGAATGGATCTGTTACAGAATACAGCGAATTGGAGGCTCAATTTCATGCTCTTTCTGAGATTTCAAATTCTTCATGCACCCCAGTTGCACCTTCTAATCGAAAGATTCAAAGGAAGCTTGTAGTGATGTCCTCTGGTTCTGAGGATGAGGGTTTATATAACGGGCATCCTCTAGACATGTGTGATGATGCTAACAATGGACCATCTCTTGAAGACAACGGTGATTCTCCATCTAAATTTCCAATTAATAATAAATATAGCAGCACGCCATTTCTTAATCGGCGTACCGGATTGGAGGAGTCTGAGGTGGACCTGAGTAAACGTTTAGGAACAGCTGATGGTATGTGTTTAAATGAAACATCCAAGTCATTTGATGTATCCTGCGTTCCAGAATCAACTTTCGTTCCTGAGACCATTAATGAAGTGGAGACTATCTCTGGAGCAGTGTCTTGTGGCAATCTTGCTGATCCTGTGGAAGTCTCTGTGAATAACGAGTCACTACCATTCACTTTCCGTGTCTGTAATTGCTTAACCAAGCGAGCACAAGATGATGATTTGTTGGGAAGTACCAAAATACCAGAATATTCTCAAAAAGAGATCTCGCAAGATTTAGTTGATGAAAATATGGAAACTACACCTGTGTATAATGTGATGGATGAATGCAGTCGGGTGGATTTCAAAATGAAGTCCCATTTTATCGAACCCCTTCCATCAACGGGGACTGATGTTATACATAAGCTGTGGAGAGAACTTCGTGAATGTCGAACAGATTTAAGACAGCATGTTGCCACTGAACAGCCAGGTGCTTTTCAAGTTGTTAAACTAGCTTGTGGTATGAGCAATCTAATATCAGAGGCTGACTTGCTGTTTAGCAACTACCAACAAAAAGATTGTGATATTTTGGAAGCCCCATCTCCACTTTTTAATGAAGGCACATTTAATTGGTATGATGAGCAAATGATGGTATCCACTGTTGCTGAACATGGGTTTTGTTTTTACGCTAAGCACTTGTCAGATATGGGATTGAAGTCAGGCCGCGATAACTGTGTAGATTTGACTTTGGAGATGTTGGCTTCCACTACTAACATAATGGCCTTGGGCCATTTATCTAGACAGGGCCTCACAAACCGTACTAACCCCTGTACTGAAAAGGACTTAGAGAACAGGTCAAGAAATGATTTGCCAGGCAGCCAAATGCAAACATCACTGTTCGATGTAGTCCAGTCCATTGTTCCTGCGAGATTATCCTTAGCCCTGAAAGGTGTTGCATTCAATGAATATCTATCTTCATTGCGCCTTATTGCCGGCTTAGAAGATTTCCGCATGTCACAAGGTGCTGAAAAGACTAGAAGGCGAAGGGCACGGGTTGCTCAACATTACTTGAGCAAGGGTACTATGACGTTGTCGCGTGAAGATATATCATTGTTGTGTGAAGGAGATCTGTACAGGAAGATTTTCCCCAAGTATGTTGCTGCCAGCAACAAGCTATATGGCGTTAAGCTTGAAACTAAAGGGTCAAATATTTCCATGAAGTAG 3723 0.4316 MDGSTVELSPNNLATPKRRNDRRKLVQSTLFPQKTQESDDRADDQQEEEEAHCCANENKKGKSKLKVTPRTKNSKQKEKQLQNTTPKKRSPNGVKGASSRQMVNDVAQINMAVPDLRLEAKLSAEENSRMFAGRQIHPFFSSWKVGKKPHEAAESELSLCGARRKDEEVLARAAIHVFENNQDINDTSLPDWKNWTFLGQTAKANCCPESSFSSVFEGSIEPLNIDKLHSTFYPPGCIDSQNVPSGSDQQSIESTQPQVEKSAGPAGGQTSLQSLEAELQDMKADTEQAGIFRKSDPEPQSRFLQESMRLYYHSCGDKAEGTLWTYKYKPTKAFEVCGNDESVKFLRDWLQLWHGRRYQRRKDALYRDKVDMQGDDDDHDYVCSHYDYDSEDMTEEDSLENVLLITGPIGCGKSAAVYACAQEEGFEVLELNASDCRNGTAVKQHFGDALGSRGFKRLLEHTNSSPMKKKRKLPSGLALPCNKASDALNEGVAGPIAISDDEAVCPDARSWTLPGHRNLIGYDKVQTLILIEDVDILFPEDRGCIAAIQQIAETAKGPIVLTCNSNNPALPDNFSRLCVSFSLPSAKELLCHLYMVCVTEAVNIHPLILEKFIQSCGGDIRKTIMHLQFWFQSKRLRKDRKAQKLYSSLPFDLEVGHQILPKMMPWDFPSQLSELIENEVTKVITTMEENSSLQRSVEKQFDVNEKQSDSEAQQMGADCIEAKKVEMLERNGSVTEYSELEAQFHALSEISNSSCTPVAPSNRKIQRKLVVMSSGSEDEGLYNGHPLDMCDDANNGPSLEDNGDSPSKFPINNKYSSTPFLNRRTGLEESEVDLSKRLGTADGMCLNETSKSFDVSCVPESTFVPETINEVETISGAVSCGNLADPVEVSVNNESLPFTFRVCNCLTKRAQDDDLLGSTKIPEYSQKEISQDLVDENMETTPVYNVMDECSRVDFKMKSHFIEPLPSTGTDVIHKLWRELRECRTDLRQHVATEQPGAFQVVKLACGMSNLISEADLLFSNYQQKDCDILEAPSPLFNEGTFNWYDEQMMVSTVAEHGFCFYAKHLSDMGLKSGRDNCVDLTLEMLASTTNIMALGHLSRQGLTNRTNPCTEKDLENRSRNDLPGSQMQTSLFDVVQSIVPARLSLALKGVAFNEYLSSLRLIAGLEDFRMSQGAEKTRRRRARVAQHYLSKGTMTLSREDISLLCEGDLYRKIFPKYVAASNKLYGVKLETKGSNISMK 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5351g00048 1240 MobiDBLite consensus disorder prediction 1 101 - -
Pral5351g00048 1240 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 586 647 - -
Pral5351g00048 1240 MobiDBLite consensus disorder prediction 85 101 - -
Pral5351g00048 1240 MobiDBLite consensus disorder prediction 1 15 - -
Pral5351g00048 1240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 323 632 IPR027417 -
Pral5351g00048 1240 Gene3D - 584 648 - -
Pral5351g00048 1240 MobiDBLite consensus disorder prediction 36 64 - -
Pral5351g00048 1240 Gene3D - 322 583 IPR027417 -
Pral5351g00048 1240 Pfam ATPase family associated with various cellular activities (AAA) 403 439 IPR003959 GO:0005524|GO:0016887
Pral5351g00048 1240 MobiDBLite consensus disorder prediction 1104 1123 - -
Pral5351g00048 1240 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 12 1214 IPR004582 GO:0006281
Pral5351g00048 1240 MobiDBLite consensus disorder prediction 239 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5351g00048 Pral-Chr5351 250812 261686 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5351g00048 324 648 Core DNA Replication Machinery Family AT5G22010 21.341 3.28e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5351g00048 K26118 - gmx:100784209 1204.89