Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5351g00047 ATGGACGGCTCTACAGTGGAGCTCAGTCCAAACAATCTGGCCACACCCAAGCGCCGGAATGATCGCCGGAAGTTGGTTCAGTCGACATTGTTCCCTCAGAAAACTCAAGAGTCCGATGACAGAGCTGATGATCAACAAGAGGAAGAAGAGGCACACTGTTGTGCGAATGAGAACAAGAAGGGAAAGTCCAAACTGAAAGTTACTCCTCGAACCAAGAATTCCAAGCAAAAGGAGAAGCAGCTGCAGAATACTACGCCAAAGAAACGGTCACCCAATGGGGTTAAGGGGGCAAGCTCACGGCAAATGGTGAACGACGTGGCACAGATTAATATGGCAGTCCCTGATTTGCGTTTGGAGGCAAAACTGTCAGCTGAGGAAAATTCGAGGATGTTTGCTGGACGGCAAATACATCCCTTTTTTTCTTCATGGAAGGTTGGGAAGAAACCTCATGAGGCAGCTGAATCGGAACTCAGTTTATGTGGAGCGAGGAGGAAAGATGAGGAAGTACTTGCCCGTGCTGCTATTCATGTGTTTGAAAATAATCAGGATATCAATGATACATCATTGCCAGACTGGAAAAACTGGACTTTTTTGGGGCAGACTGCCAAAGCAAATTGCTGTCCAGAAAGTTCATTTTCCTCTGTTTTTGAGGGTTCTATTGAGCCCTTAAATATTGATAAGCTTCACAGTACTTTTTATCCCCCTGGCTGTATAGATTCTCAAAATGTCCCATCTGGTTCAGATCAACAATCTATAGAATCTACGCAGCCTCAAGTAGAAAAGTCAGCTGGACCGGCTGGAGGGCAAACAAGCCTTCAATCACTAGAAGCTGAATTGGACATGAAAGCCGATACTGAGCAAGCTGGCATTTTTAGAAAGTCAGATCCTGAACCACAGAGTAGATTTCTTCAAGAGAGCATGAGGTTGTATTACCATAGTTGTGGAGATAAGGCCGAGGGAACCTTATGGACATACAAGTACAAGCCAACAAAGGCCTTTGAGGTATGTGGTAATGATGAGTCTGTGAAATTTTTGCGTGACTGGTTACAACTCTGGCATGGAAGACGTTATCAGAGAAGGAAAGATGCCTTGTATAGGGATAAAGTTGATATGCAAGGCGATGACGATGATCATGATTATGTCTGTTCTCATTATGACTATGATTCAGAAGACATGACCGAGGAGGACTCCCTGGAGAATGTCCTCTTAATTACTGGACCAATAGGGTGTGGGAAGTCTGCGGCTGTATATGCTTGTGCACAAGAGGAGGGGTTTGAGGTTCTAGAGCTCAATGCATCAGACTGTCGGAATGGGACTGCTGTCAAGCAACACTTTGGAGATGCTCTTGGATCACGTGGGTTCAAAAGGTTATTGGAACACACCAATAGTTCACCAATGAAGAAAAAGAGGAAGTTACCCTCAGGCCTGGCTTTGCCTTGTAACAAAGCATCTGATGCGTTAAATGAAGGGGTAGCTGGACCAATAGCCATATCTGATGATGAAGCTGTCTGCCCTGATGCAAGATCTTGGACATTACCCGGCCACAGAAACTTAATTGGGTATGATAAAGTCCAAACATTAATTCTAATTGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATACAACAAATTGCAGAGACAGCCAAGGGGCCAATTGTACTAACCTGCAATAGCAATAATCCTGCGCTGCCAGATAATTTTAGTAGATTGTGTGTTTCTTTCTCATTGCCATCCGCAAAGGAGTTGCTGTGCCACTTGTACATGGTTTGTGTCACAGAAGCAGTCAACATTCATCCTCTCATATTGGAGAAATTTATACAATCTTGTGGCGGTGATATCCGCAAAACCATCATGCATCTTCAGTTCTGGTTCCAGAGTAAAAGATTAAGAAAAGACAGAAAAGCACAGAAATTGTATAGCTCGCTTCCATTTGACCTTGAGGTTGGCCATCAGATACTGCCCAAGATGATGCCCTGGGATTTTCCCTCTCAGTTATCTGAACTAATTGAGAACGAAGTTACCAAGGTAATAACCACAATGGAGGAAAACTCTAGTTTGCAGAGGTCAGTTGAGAAGCAGTTTGACGTAAATGAAAAGCAAAGTGATTCAGAGGCGCAGCAGATGGGAGCTGATTGCATAGAGGCCAAAAAAGTAGAAATGCTTGAGAGGAATGGATCTGTTACAGAATACAGCGAATTGGAGGCTCAATTTCATGCTCTTTCTGAGATTTCAAATTCTTCATGCACCCCAGTTGCACCTTCTAATCGAAAGATTCAAAGGAAGCTTGTAGTGATGTCCTCTGGTTCTGAGGATGAGGGTTTATATAACGGGCATCCTCTAGACATGTGTGATGATGCTAACAATGGACCATCTCTTGAAGACAACGGTGATTCTCCATCTAAATTTCCAATTAATAATAAATATAGCAGCACGCCATTTCTTAATCGGCGTACCGGATTGGAGGAGTCTGAGGTGGACCTGAGTAAACGTTTAGGAACAGCTGATGGTATGTGTTTAAATGAAACATCCAAGTCATTTGATGTATCCTGCGTTCCAGAATCAACTTTCGTTCCTGAGACCATTAATGAAGTGGAGACTATCTCTGGAGCAGTGTCTTGTGGCAATCTTGCTGATCCTGTGGAAGTCTCTGTGAATAACGAGTCACTACCATTCACTTTCCGTGTCTGTAATTGCTTAACCAAGCGAGCACAAGATGATGATTTGTTGGGAAGTACCAAAATACCAGAATATTCTCAAAAAGAGATCTCGCAAGATTTAGTTGATGAAAATATGGAAACTACACCTGTGTATAATGTGATGGATGAATGCAGTCGGGTGGATTTCAAAATGAAGTCCCATTTTATCGAACCCCTTCCATCAACGGGGACTGATGTTATACATAAGCTGTGGAGAGAACTTCGTGAATGTCGAACAGATTTAAGACAGCATGTTGCCACTGAACAGCCAGGTGCTTTTCAAGTTGTTAAACTAGCTTGTGGTATGAGCAATCTAATATCAGAGGCTGACTTGCTGTTTAGCAACTACCAACAAAAAGATTGTGATATTTTGGAAGCCCCATCTCCACTTTTTAATGAAGGCACATTTAATTGGTATGATGAGCAAATGATGGTATCCACTGTTGCTGAACATGGGTTTTGTTTTTACGCTAAGCACTTGTCAGATATGGGATTGAAGTCAGGCCGCGATAACTGTGTAGATTTGACTTTGGAGATGTTGGCTTCCACTACTAACATAATGGCCTTGGGCCATTTATCTAGACAGGGCCTCACAAACCGTACTAACCCCTGTACTGAAAAGGACTTAGAGAACAGGTCAAGAAATGATTTGCCAGGCAGCCAAATGCAAACATCACTGTTCGATGTAGTCCAGTCCATTGTTCCTGCGAGATTATCCTTAGCCCTGAAAGGTGTTGCATTCAATGAATATCTATCTTCATTGCGCCTTATTGCCGGCTTAGAAGATTTCCGCATGTCACAAGGTGCTGAAAAGACTAGAAGGCGAAGGTACGTGTTGCCGAAGCCAATTCTGGCACGGGTTGCTCAACATTACTTGAGCAAGGGTACTATGACGTTGTCGCGTGAAGATATATCATTGTTGTGTGAAGGAGATCTGTACAGGAAGATTTTCCCCAAGTATGTTGCTGCCAGCAACAAGCTATATGGCGTTAAGCTTGAAACTAAAGGGTCAAATATTTCCATGAAGTAG 3744 0.4319 MDGSTVELSPNNLATPKRRNDRRKLVQSTLFPQKTQESDDRADDQQEEEEAHCCANENKKGKSKLKVTPRTKNSKQKEKQLQNTTPKKRSPNGVKGASSRQMVNDVAQINMAVPDLRLEAKLSAEENSRMFAGRQIHPFFSSWKVGKKPHEAAESELSLCGARRKDEEVLARAAIHVFENNQDINDTSLPDWKNWTFLGQTAKANCCPESSFSSVFEGSIEPLNIDKLHSTFYPPGCIDSQNVPSGSDQQSIESTQPQVEKSAGPAGGQTSLQSLEAELDMKADTEQAGIFRKSDPEPQSRFLQESMRLYYHSCGDKAEGTLWTYKYKPTKAFEVCGNDESVKFLRDWLQLWHGRRYQRRKDALYRDKVDMQGDDDDHDYVCSHYDYDSEDMTEEDSLENVLLITGPIGCGKSAAVYACAQEEGFEVLELNASDCRNGTAVKQHFGDALGSRGFKRLLEHTNSSPMKKKRKLPSGLALPCNKASDALNEGVAGPIAISDDEAVCPDARSWTLPGHRNLIGYDKVQTLILIEDVDILFPEDRGCIAAIQQIAETAKGPIVLTCNSNNPALPDNFSRLCVSFSLPSAKELLCHLYMVCVTEAVNIHPLILEKFIQSCGGDIRKTIMHLQFWFQSKRLRKDRKAQKLYSSLPFDLEVGHQILPKMMPWDFPSQLSELIENEVTKVITTMEENSSLQRSVEKQFDVNEKQSDSEAQQMGADCIEAKKVEMLERNGSVTEYSELEAQFHALSEISNSSCTPVAPSNRKIQRKLVVMSSGSEDEGLYNGHPLDMCDDANNGPSLEDNGDSPSKFPINNKYSSTPFLNRRTGLEESEVDLSKRLGTADGMCLNETSKSFDVSCVPESTFVPETINEVETISGAVSCGNLADPVEVSVNNESLPFTFRVCNCLTKRAQDDDLLGSTKIPEYSQKEISQDLVDENMETTPVYNVMDECSRVDFKMKSHFIEPLPSTGTDVIHKLWRELRECRTDLRQHVATEQPGAFQVVKLACGMSNLISEADLLFSNYQQKDCDILEAPSPLFNEGTFNWYDEQMMVSTVAEHGFCFYAKHLSDMGLKSGRDNCVDLTLEMLASTTNIMALGHLSRQGLTNRTNPCTEKDLENRSRNDLPGSQMQTSLFDVVQSIVPARLSLALKGVAFNEYLSSLRLIAGLEDFRMSQGAEKTRRRRYVLPKPILARVAQHYLSKGTMTLSREDISLLCEGDLYRKIFPKYVAASNKLYGVKLETKGSNISMK 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5351g00047 1247 MobiDBLite consensus disorder prediction 1 101 - -
Pral5351g00047 1247 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 12 1221 IPR004582 GO:0006281
Pral5351g00047 1247 MobiDBLite consensus disorder prediction 85 101 - -
Pral5351g00047 1247 MobiDBLite consensus disorder prediction 1 15 - -
Pral5351g00047 1247 MobiDBLite consensus disorder prediction 1103 1122 - -
Pral5351g00047 1247 Gene3D - 583 647 - -
Pral5351g00047 1247 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 585 646 - -
Pral5351g00047 1247 MobiDBLite consensus disorder prediction 36 64 - -
Pral5351g00047 1247 Gene3D - 321 582 IPR027417 -
Pral5351g00047 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 322 631 IPR027417 -
Pral5351g00047 1247 MobiDBLite consensus disorder prediction 239 269 - -
Pral5351g00047 1247 Pfam ATPase family associated with various cellular activities (AAA) 402 438 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5351g00047 Pral-Chr5351 250811 261686 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5351g00047 323 647 Core DNA Replication Machinery Family AT5G22010 21.341 2.79e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5351g00047 K26118 - gmx:100784209 1199.11