Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5351g00039 ATGGGGATGAGCGAGGTGATGCGCAAGGTGAAGCCATACTTGGCTATCATCTCCCTTCAGTTTGGCTACTCAGGCATGTACGTCATCACCATGGTTTCTTTCAAGCATGGAATGAGCCACTGGGTTCTCTCTGTCTACCGTCATGTCGTCGCCCTCCTTATCATTGCTCCTTTTGCTCTTGTCCTTGAAAGAAAAATAAGGCCCAAGATGACTCTCCCAATCTTCCTCAGGATGGTGGCGCTTGGTTTCCTTGAGCCAGTGCTGGATCAGAACTTGTACAACATGGGGATGAAGGCCACCTCAACAACTTTCGCATCCGCCATTGTTAATGTCCTCCCAGCTATTACTTTTCTGATGGCACTCATTTTCAGGTTAGAGAGTGTGAACCTGAAAAAATTACCCAGCTGGGCCAAGATAATAGGAACCGTAATAACAGTGTCAGGTGCCATGGTAATGACTTTGTACAAAGGCAAAGCCTTTCAGATCATAAAGGCAGGAGGCATAAGCCATCATGATACTGCCTCCACCGAACCCTCTGACCAGCACTGGGTGCTCGGCACCGTTTACCTCATCGGAAGTTGCTGTGGCTGGGCTGGCTTCTTCATTTTGCAGTCATTCACTTTGAAGATGTACCCGGCAGAGCTCTCGCTCACGGCTTGGATTTGCGCGACGGGAATTGTTGAGGGTTCCATCGCAACATTTATTATGGAAAGGGACTTGAGCGTCTGGGTCATTGGCTGGGATTCCAGGCTCCTCGCTTGTGTTTACTCTGGGGTGGTGTGCTCTGGCATGGCTTACTATGTACAAGGGGTTGTAACCAAAGAACGTGGACCAGTGTTTTTGACTTCTTTTAGCCCATTGATCATGATTATTACTGCAGCTTTGGGTTCCTTTGTGCTAGCCGAGCAAGTCCACGTGGGAAGCATAATTGGAGCTATACTCATCGTGTTCGGGCTTTACTCTGTGGTGTGGGGGAAAAGCAAAGACATTCAAAGCACAAGCGACGACACAGTGAAAGGGGAAGGTCACGAATTGCCAATAAAGGACGGCACAAGGTCAGGATCAGACATTTTTGACAAGATTGAGGTCAGTGTTCCTGCTGAGAAGTCGAAGGGTCCGGGGAAGAACATTAATGTGCCACAAACAGCACCCCCACCAAGATCATGA 1167 0.4876 MGMSEVMRKVKPYLAIISLQFGYSGMYVITMVSFKHGMSHWVLSVYRHVVALLIIAPFALVLERKIRPKMTLPIFLRMVALGFLEPVLDQNLYNMGMKATSTTFASAIVNVLPAITFLMALIFRLESVNLKKLPSWAKIIGTVITVSGAMVMTLYKGKAFQIIKAGGISHHDTASTEPSDQHWVLGTVYLIGSCCGWAGFFILQSFTLKMYPAELSLTAWICATGIVEGSIATFIMERDLSVWVIGWDSRLLACVYSGVVCSGMAYYVQGVVTKERGPVFLTSFSPLIMIITAALGSFVLAEQVHVGSIIGAILIVFGLYSVVWGKSKDIQSTSDDTVKGEGHELPIKDGTRSGSDIFDKIEVSVPAEKSKGPGKNINVPQTAPPPRS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5351g00039 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 327 - -
Pral5351g00039 388 MobiDBLite consensus disorder prediction 332 366 - -
Pral5351g00039 388 Pfam EamA-like transporter family 17 153 IPR000620 GO:0016020
Pral5351g00039 388 Pfam EamA-like transporter family 186 323 IPR000620 GO:0016020
Pral5351g00039 388 PANTHER WAT1-RELATED PROTEIN 11 330 IPR030184 GO:0016020|GO:0022857
Pral5351g00039 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 157 - -
Pral5351g00039 388 MobiDBLite consensus disorder prediction 332 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5351g00039 Pral-Chr5351 220621 223381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5351g00039 7 349 Nodulin-like Gene Family AT4G08300 66.763 4.89e-167 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5351g00039 - - gmx:100811114 605.905