Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5351g00037 ATGGGAGAGATATGTGGAACCAGCAGCAGTTTGGTGAACAAGGCAAAGCCTTTTGTGCTAATGGTGGCATTGCAATTCTTGCTAGCAGGAACTGTGCTGTTCGCAATGACCAGCGCGAAGCACGGTGTTAATCGTTTTGTGTTTAGTGCCTATCGCAATGCCTTTGCTGCTCTTTCCCTTGCTCCTTTTGCTTTCTTCCTTGATAGGAAAGTGAGGCCCAAGATGACAATCTCTGTATTTTTACAGATCATGCTTCTCGGCTTTCTGGAGCCGGTGGTGGACCAAGGTTTCACTTTCTTGGGGATGCAGTACACTTCAGCTGCGTTTACGTCTGCTATCATCAACACCGTGCCCTCCCTCACCTTTGTATTAGCTATCATCTTTAGGTTGGAGCGTTTGAGGATGAGGGAGGCAGGGAGCAGAGCGAAGGTGGTGGGAACGATGGTGACGTTTGGAGGGGCGCTGCTGATGACGCTGTACAAAGGCCCCATCGTACCCCTTTTTCATTCTGCAACTAGCGCAAGCAAGCAGCAGGCAGAGGGACGCCATGATTCCCCTCACAAACACTGGCTCATCGGAACACTTTTCCTACTCCTAGGTTGTGCCGCTTGGTCTTGTTTCTTCATCTTGCAGTCGATAACGGTGAAGAAATACCCGGCGGAACTGTCACTGGCGTGCTTGATATGCTTAGTGGGCAGCTTGCAGAGTGGAGTTGCGGCTCTTATATCGGACCACCACCCCGGCGCTTGGTCTCTCGGCTGGGACTACAGGCTCTTTTCTCCTCTCTACGCGGGAATAGCTGGGTCGGGGATAGCGTATTACGTGCAAGGATTGGTGCTGCAGACCAAAGGCCCAGTGTTCGTGACGGCCTTCTATCCCCTCTGCATGGTCATCGTTGCTGCTTTGAGCTCCTTCCTTCTGTCCGAACAACTCCATCTCGGAAGTATAATAGGAGGGATGATTATCGCTGTGGGTCTGTACTGTGTGGTGTGGGGAAAAGGCAAGGACGAGCTGGCAGACCCGACGCCACCGGCAACAGTGAAGGAATCAGCACAAGAGCTGCCAGTTACCTCAATGGATACTGCTGACAAACCTATTTATTACCAAACCCCCAAGTGA 1119 0.5174 MGEICGTSSSLVNKAKPFVLMVALQFLLAGTVLFAMTSAKHGVNRFVFSAYRNAFAALSLAPFAFFLDRKVRPKMTISVFLQIMLLGFLEPVVDQGFTFLGMQYTSAAFTSAIINTVPSLTFVLAIIFRLERLRMREAGSRAKVVGTMVTFGGALLMTLYKGPIVPLFHSATSASKQQAEGRHDSPHKHWLIGTLFLLLGCAAWSCFFILQSITVKKYPAELSLACLICLVGSLQSGVAALISDHHPGAWSLGWDYRLFSPLYAGIAGSGIAYYVQGLVLQTKGPVFVTAFYPLCMVIVAALSSFLLSEQLHLGSIIGGMIIAVGLYCVVWGKGKDELADPTPPATVKESAQELPVTSMDTADKPIYYQTPK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5351g00037 372 Pfam EamA-like transporter family 19 158 IPR000620 GO:0016020
Pral5351g00037 372 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Pral5351g00037 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 335 - -
Pral5351g00037 372 MobiDBLite consensus disorder prediction 340 372 - -
Pral5351g00037 372 PANTHER WAT1-RELATED PROTEIN 16 345 IPR030184 GO:0016020|GO:0022857
Pral5351g00037 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5351g00037 Pral-Chr5351 210533 212647 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5351g00037 12 359 Nodulin-like Gene Family AT1G44800 45.559 2.61e-114 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5351g00037 - - gmx:100782997 470.314