Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5351g00032 ATGGTCAAGAGAGGGCACAAGATCCACACAGAGACATCAAAGCCAATTCAACCTCAATCTTCGTCGCCAGCAGCATCAGATGGGAAAAAGAAGTACAAGGGAGTGAGAATGAGAAGCTGGGGTTCATGGGTTTCAGAGATCAGAGCACCAAACCAGAAAACAAGAATATGGTTGGGGTCTTATTCAACCCCCGAGGCTGCCGCTCGAGCCTACGATGCTGCACTTCTATGCCTTAAGGGTTCTTCAGCAAATCTCAACTTCCCTTCAAGTTCTTCACACTATATTCCTCAGGATACCGTTATGTCTCCAAAATCAATACAAAGAGTTGCTGCAGCGGCTGCTAATAGCTTTGCTGACAATGCCACAACCCCACCTTCGCCTCCCCCTGCCTCTGCCTCGACCTCATCTTCCTCAATCGTCTCGTCCCCATCAATGTCCTCCGATCAAATCGATGACGATGTCTCACTGTCATTTGGCGCCTACACTAGCTGTGATCAGACTGGTGAACCAGTCTCTTTGATGGACTCTTATTGGTATAGCTTTGATGATTTACAATCCCCAAAGTATGTAAATCAAATGCTCGGTGGTAATTTGTTTGATATTGATCCCACACAGCTGCTGGATGATTGTTGCGAAGAAAGTGATATTCGTTTGTGGAGCTTCTGCTGA 669 0.4664 MVKRGHKIHTETSKPIQPQSSSPAASDGKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPSSSSHYIPQDTVMSPKSIQRVAAAAANSFADNATTPPSPPPASASTSSSSIVSSPSMSSDQIDDDVSLSFGAYTSCDQTGEPVSLMDSYWYSFDDLQSPKYVNQMLGGNLFDIDPTQLLDDCCEESDIRLWSFC 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5351g00032 222 MobiDBLite consensus disorder prediction 1 32 - -
Pral5351g00032 222 MobiDBLite consensus disorder prediction 132 150 - -
Pral5351g00032 222 Gene3D AP2/ERF domain 30 89 IPR036955 GO:0003700|GO:0006355
Pral5351g00032 222 SMART rav1_2 31 94 IPR001471 GO:0003700|GO:0006355
Pral5351g00032 222 SUPERFAMILY DNA-binding domain 31 89 IPR016177 GO:0003677
Pral5351g00032 222 Pfam AP2 domain 31 80 IPR001471 GO:0003700|GO:0006355
Pral5351g00032 222 FunFam ethylene-responsive transcription factor ERF014-like 30 90 - -
Pral5351g00032 222 MobiDBLite consensus disorder prediction 118 150 - -
Pral5351g00032 222 CDD AP2 30 90 IPR001471 GO:0003700|GO:0006355
Pral5351g00032 222 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
Pral5351g00032 222 MobiDBLite consensus disorder prediction 12 26 - -
Pral5351g00032 222 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 148 - -
Pral5351g00032 222 PRINTS Ethylene responsive element binding protein signature 54 70 IPR001471 GO:0003700|GO:0006355
Pral5351g00032 222 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5351g00032 Pral-Chr5351 188775 189845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5351g00032 32 221 AP2-EREBP Transcription Factor Family AT1G21910 52.174 1.54e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral5351g00032 AP2 2.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5351g00032 - - qsa:O6P43_015204 276.174