Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5351g00030 ATGCCCGTGGACATGGGCATGGACTCCGTCCATGAACTTCAATTCTCCGGCTACAGCAGCACCACCACACCAACCAAGGATGATGATTATGCCGCCGGTTGCCATTGGAACCACTGGTCCCCCCTTGTCAACTGGGAAGCCTTCGCCGGCGCCGAAGACGATTTCCACGGCCTCATAGAGTCCATGATAGATGACTCTGCCGGCATCCTCAGCCCCCAACACGGAACGGAAGAAGGCTGCAACTCGGCCAACTCTTCCTCGACTGAAGTAACCCTGGTGGACGAAGAGTTAAGCGACGGTGTCGAGGATTTCAAGGGTCTCAGGCTGGTGCACCTTCTGATGGCGGCCGCCGAAGCCCTCGCCGGCGCCAATAAGAGCCATGATCTGGCTCGAGTGATATTGATTCGGCTCAAGGAGTTGGTTTCCCCCACCGACGGCTCCAACATGGAGAGGTTGGCGGCGTATTTTACGGAAGCCTTGCAGGGTTTGCTAGAAAGCGCGGGGGACTCACAGGATAACAGCCATCACCACAGGCATTTCATCGGCAATGGACCCCACCGTGAGGACCACCCTCCGATGGATATGCTGGCCGCCTTCCAGCTCCTTCAGGACATGTCCCCTTACGTCAAGTTCGGCCACTTCACCGCAAATCAGGCCATCCTGGAGGCCGTGGCCAACGAGAGGCGAGTCCACATCATCGATTATGACATCATGGAAGGCATCCAGTGGGCCTCCTTAATTCAGGCCCTCGCAGCCAAAACAGACGGCCTGCCCGGACCACACCTCAGGATCACCGCATTGTCCAGGAGCGGAGGCGGAAGAAGATCCATCGCCACCGTGCAACAGACGGGGCGTCGTTTGACGGCGTTCGCGTCTTCCGTGGGTCAACCGTTCTCGTTTCATCAATGCAGGTTGGACTCAGACGAAACATTCCGACCTTCGGGTCTGAAGCTGGTTCGAGGAGAGACCCTGGTGTTCAACTGCATGCTGCATCTTCCCCACCTCACTCACCGGGCATCCGAATCGGTGGCATCGTTCATGAACGGAGCGAAGACGTTGAATCCGAGGCTAGTGACACTGGTTGAGGAGGAGACCGGGGTGAGCGGAGACGGGGGGTTTGTGAGTCGTTTCATGGACTGTTTGCACCATTACTCGGCCCTTTACGACTCGCTGGAGGCGGGGATACCCATGCAAAGCGGGGCGAGGACGTTGGTGGAGCGGGTGTATTTGGGTCCCCGAATAGCGGGGAGGGTGGCGAGGATATACAGAAACGGGTGTGAAGAGGAGAGAGGATCGTGGGGAGAGAGCTTGGGGGAGATGGGGTACAAGGGAGTGGCCATGAGCTTCGCAAACCAATGCCAGGCGAATCTGCTATTGGGACTGTTCAACGATGGCTATAAGGCAGAGGTGTTGGGCTGCAATAAGTTGGTGTTGAGTTGGAGATGTAGGCGTTTGCTTTCCGCCTCTCTTTGGACATCTTCTTCCCCCACTGCTTCTTCTCAATCCTAG 1509 0.5719 MPVDMGMDSVHELQFSGYSSTTTPTKDDDYAAGCHWNHWSPLVNWEAFAGAEDDFHGLIESMIDDSAGILSPQHGTEEGCNSANSSSTEVTLVDEELSDGVEDFKGLRLVHLLMAAAEALAGANKSHDLARVILIRLKELVSPTDGSNMERLAAYFTEALQGLLESAGDSQDNSHHHRHFIGNGPHREDHPPMDMLAAFQLLQDMSPYVKFGHFTANQAILEAVANERRVHIIDYDIMEGIQWASLIQALAAKTDGLPGPHLRITALSRSGGGRRSIATVQQTGRRLTAFASSVGQPFSFHQCRLDSDETFRPSGLKLVRGETLVFNCMLHLPHLTHRASESVASFMNGAKTLNPRLVTLVEEETGVSGDGGFVSRFMDCLHHYSALYDSLEAGIPMQSGARTLVERVYLGPRIAGRVARIYRNGCEEERGSWGESLGEMGYKGVAMSFANQCQANLLLGLFNDGYKAEVLGCNKLVLSWRCRRLLSASLWTSSSPTASSQS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5351g00030 502 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 88 486 IPR005202 -
Pral5351g00030 502 MobiDBLite consensus disorder prediction 170 187 - -
Pral5351g00030 502 MobiDBLite consensus disorder prediction 167 187 - -
Pral5351g00030 502 ProSiteProfiles GRAS family profile. 100 492 IPR005202 -
Pral5351g00030 502 Pfam GRAS domain family 109 492 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5351g00030 Pral-Chr5351 165723 167448 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5351g00030 106 493 GRAS Transcription Factor Family AT5G41920 34.684 5.99e-55 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral5351g00030 GRAS 2.7e-97 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5351g00030 - - qsa:O6P43_015209 656.751