Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5351g00008 ATGCTTAAGTGGTTATTTGGTTTGTTTCCGGCGATGACCGGGGGCCGATGTCACCGGAGGAAGAAGGTGAAGGGCAGGGGTGTGGAGGGATATTGCGGAACCGAGGGCATGCCTTGCCCGGTTTCGAGGGTTCCGGTTGAATCCCCGGGGACCCAACCGGAAAATTCTGATAACGCCACTGCACTTGAAATTGATTACTACTCGCAGGCTATAAAAGCGCTCAGTGAGCGCTCGCCTTTTGATGTTGCGGAAGAGACTTCAACGTCGACGGTGCCCACACTGCCCAGTGGGTGGGCAAGCTTCTTAAACCGCCATTCTGAAAGTCGCAGGCGCCACAAGAAGTCCCATTCGGGTGCGGACAAGAAATCGTCTAGAGCATGTGATAAGTCGCGTAGTTCAAGCATTTGGGTTGAGACTGAGGATTACTTTAGAGACTTGAAATTGCCGGACATAGACACCTTGTTAGAGGCATCATCCTCTTTTAGTTTAGCTGCCCGGAAGTGTCTTTCTATTCCACCAGTGGGAAATGCTCCAAGGTCAAATGTAGCTAGTTACGAGGATGACAAGGAAACTGATGGGAACCTAAATAGCGAAGATGTCAAGAATGAGGACTGTGTCATGGAAAGTAACAGTGTTGCTGCTGGAGTTTTAGCTCAGGATGACAAGGGTCATGATACTTTGAATTCGTCTAGTAGTTTAGAATGGCTTTTAGGATGTAGGAATAAGATTTCTCTCATTACTGAGCGCCCTTCAAAGAGGAGGAAGGTTTTGGGTGTTGAAGCTGGGTTGGAGAGATTTTTTATGGCCAATCCTTGTGGTGGAGACTCTTCTCTGTGCCATTATTGCTGCAGGGGTGACACCAGTAGAGAGTCCAATCAATTAATTGTCTGCGATATTTGTAAAGTTGCAGTTCATAAGAACTGCTATGGTGTGCAAGATGATGTAGACGAGTCTTGGTTGTGCTCTTGGTGCAAGCAAAAGGATGACATTGATAAAATGGCGTATCCTTGCGTGCTTTGTCCAAAGAAGGGCGGCGCTTTAAAGCCTGTCCATAGACATGCGGAAAGCGCTGGGTCTGCGCAATTTGCTCACTTGTTTTGTTGTTTGTGGATGCCTGAGGTTTATATAGAGGATTTGAAGAAGATGGAGCCTGTTATGAATGTAGGAGGAGTCCAGGAAACCCGAAAAAAATTAGTCTGTAATATTTGCAAGTTGAAGTTTGGCGCATGTATTCGATGTACCCATGGATCCTGTAGGTCTGCTTTCCATCCTTTATGTGCCCGGGAAGCTAGCCACAGGATGGAGGTTTGGGCAAAAAATGGTTATGAAAATATTGAGTTGCGAGCGTTCTGTTCCAAGCACTCAGATATACAAGAGAACAGCACCATGTTGCCTTCAGGTGGCTCTGTAGCTTTTGGTAGTGATTTATCTTCTGCTGACAGCCTTCCAGCTGGCACACAGCAGAATTTGAAAATTGGTTGCCAAAATGGAGATGGTACTGGGATAGTTTCTGATGGCAGTCCTGATAAATTGAGTCATAGTGAACCGCCCGATGAAATTTTGTCTGATTGTCAGTTAAATGCTCATGAAACATCAGAATGCAGTGGTTTGCCACAACTAAATAATACAGCTGTGGTGGGGAGGACTGATGAAATTGCCAATGCATCTGACTCCCTTGGTTTTGCACTTGTTTTGAAAAAGTTGATAGATCGAGGAAAAGTTGATATTAAAGATGTAGCTTTGGAGATTGGCATTTCTTCAGATACATTAAGCGCAAATATTAATGATTCTTGCATGGCCCCTGATGTGCAAATCAAAATAGTCAATTGGCTAAAAGCTCATGTATATACTAATGCATTTCAGAAAAGTTTGAAAGTCAAATTCAAGCCTGCCAATTCATCCAAGGATGAAAATGGAATCATTGATGGTTCTGATTCTTTACAGATATCAGATTCTGAGTTGCCAGATCCTGTTGCTGTTAAGTCAGTGCCTTCAAGGAGAAGAACAACTGGTAATATCAGGATTTTGAATAACAAAGCGATGTGTTCATCTGGGGTGGTGTCTAGAGAGAGCGGAATGCCAATGGACAAGTTCAAGGGAGGTCAATTTGAACATGAAAATTTGGAAACATTGAATGAAGCGTCCATGCCTGATGCAACTGAAATGAAATTAACCAAGTCTGAGGATGCTTCTTTTGACTACCAAGGGAATGCCGATAAACCTAGCAAAATAAGCTTATCTGGAGGTGTTTTGGAAGAAAAGCCTGCTAATGCTTCTATTTTTTCTGATCACCACCATTCTCCTTGTTCTGCTGCAGATTTACCCGCTTCTGATTTCATGAAGATTGAAGGAAACTCGTTTTATATTCACCCATACATCCATAAGAAGTTATCGGAGATTCGTGATGGGGTGCTTTCGAAGGATGTTATATGTCAAAGGGAGGAAGAAAATTTTTATTTGGAGGGATTCTCAGGGGCTAGTGGTGGCTCCAGTTTCCAAAATTCAGAAGTAACTTGCAGTGACATCCGTAATGTTGATAAAGTAAATACGAAGCAATTGGTTATGGCTAGAGATATGGGTTTATTAGAATTTTGTCCAAAAGATGAAGTGGAGGGTGAACTAATATATCTTCAGCATAGATTATTGCAGAATGCAGTTGCAAGGAAGAAGCTTGCTGATAATTTAATCTCTAGGATAGTTAAGAGTCTTCCGCAGGAGATTGATGCAACCCACCAGCAAAGATGGGATGCTGTACTTGTTAATCAGTACCTCCGTGATCTTAGGGAAGCAAAAAAGCAGGGAAGAAAAGAGAGAAGGCACAAGGAAGCACAGGCAGTGTTGGCTGCTGCAACTGCTGCAGCAGCAGCATCATCTAGGGTTTCTTCATTGCGGAAAGATGCCTTTGAAGAACCTGTACTGCCGGAGAATTTGTTAAAGCACACTTCCAGTGGAAGGACTGGTGTTTGCTCTCAGCCAATGCCACAGGCTAAAGAAACACTTTCTAGAGGAACTATGTTTAGGAATTCATCAGAAAAACATTCAGATTTGGGTCTGCCAGATGCAGATTTTTCTAAGGAGCATCCCAAATTGTGTGATATCTGTAGACGATCTGAAACTATATTGAACCCAATTCTCATCTGCTCCGGTTGCAAGGTTGCTGTTCACTTGAATTGCTATCGTAGTGTGAAGGAATTTACAGGTCCATGGTACTGTGAATTATGTGAGGATTTATCATTCAGAATATCTGGGCAACCTTCTATAAATTCCTGGGAGAAACCTTATTTTGTTGCGGAATGTGGGATATGTGGTGGTACTACTGGTGCTTACAGGAAGACTTCAGACGGTCATTGGGTCCATGCCTTTTGTGCTGAGTGGGTTTTTGAGTCGACTTTCAGAAGAGGACAAGTAAATGCTGTTGAAGGAATGGAAACTGTGTTGAAAGGAGTTGACACTTGTTGCATATGCCGCCGCAAGCAAGGTGTATGTTTAAAGTGTAGTTATGGCCATTGTCAGACCACATTTCATCCATCCTGTGCTAGAAGCGCTGGTTTTTACATGAATGTGAGGGCTGTCAGTGGCAAGCTGCAGCACAGGGCTTACTGTGAAAAGCACGGTTCAGAGCAGAGGGCAAAGGCTGAAAGCCAAAAACATGGAATTGAAGAGTTAAAAGGTATCAAGCAAATTAGGGTTGAGTTAGAGAGATTACGTCTCCTGTGTGAAAGAATTGTCAAACGTGAAAAGATAAAGCGGGAATTGGTTCTGTGTTCACACGACATACTTGCCTTCAAAAGAGATCACGTTGCTAGGTCTGTCTTGGTGAATAGCCCTTTCATCCTTCCTGATTGTAGTTCAGAATCAGCTACAACATCCCTTAAAGGGAACACAGAGGGATACAGATCATGTAGTGAAGCTGTCCAAAGGTCGGATGATGTGACTGTGGACAGCTCAGTTTCAGCCAAGCATCGATTACGAGTTGCTGTTACCATGGACAGTGACCCGAAGTTGGATGATGACTGTTCAACTTCACAAAGCCATTATAATCATAAGATTCCTGAGAGGGTGCAGTTTTCTGGCAAGCAGGTTCCTCACAGAGCTTCAATCATATCACGAAATCTTTCAGATGACAGTGGATGGAGATCAAAATCAAGAAAGCATCAAGAGACATTTGGAAAAGAGCTGGTTATGACGTCAGACGAAGCATCAATGAAGAATTCTATGTTACCTAAAGGATATGCATATGTTCCTGCCGATTGCCTGTCTAATGATAAGCGAACCAAGCAGGATGTATTTACGAGTGAACCAGCGGAGCATAATGGGTAA 4320 0.4331 MLKWLFGLFPAMTGGRCHRRKKVKGRGVEGYCGTEGMPCPVSRVPVESPGTQPENSDNATALEIDYYSQAIKALSERSPFDVAEETSTSTVPTLPSGWASFLNRHSESRRRHKKSHSGADKKSSRACDKSRSSSIWVETEDYFRDLKLPDIDTLLEASSSFSLAARKCLSIPPVGNAPRSNVASYEDDKETDGNLNSEDVKNEDCVMESNSVAAGVLAQDDKGHDTLNSSSSLEWLLGCRNKISLITERPSKRRKVLGVEAGLERFFMANPCGGDSSLCHYCCRGDTSRESNQLIVCDICKVAVHKNCYGVQDDVDESWLCSWCKQKDDIDKMAYPCVLCPKKGGALKPVHRHAESAGSAQFAHLFCCLWMPEVYIEDLKKMEPVMNVGGVQETRKKLVCNICKLKFGACIRCTHGSCRSAFHPLCAREASHRMEVWAKNGYENIELRAFCSKHSDIQENSTMLPSGGSVAFGSDLSSADSLPAGTQQNLKIGCQNGDGTGIVSDGSPDKLSHSEPPDEILSDCQLNAHETSECSGLPQLNNTAVVGRTDEIANASDSLGFALVLKKLIDRGKVDIKDVALEIGISSDTLSANINDSCMAPDVQIKIVNWLKAHVYTNAFQKSLKVKFKPANSSKDENGIIDGSDSLQISDSELPDPVAVKSVPSRRRTTGNIRILNNKAMCSSGVVSRESGMPMDKFKGGQFEHENLETLNEASMPDATEMKLTKSEDASFDYQGNADKPSKISLSGGVLEEKPANASIFSDHHHSPCSAADLPASDFMKIEGNSFYIHPYIHKKLSEIRDGVLSKDVICQREEENFYLEGFSGASGGSSFQNSEVTCSDIRNVDKVNTKQLVMARDMGLLEFCPKDEVEGELIYLQHRLLQNAVARKKLADNLISRIVKSLPQEIDATHQQRWDAVLVNQYLRDLREAKKQGRKERRHKEAQAVLAAATAAAAASSRVSSLRKDAFEEPVLPENLLKHTSSGRTGVCSQPMPQAKETLSRGTMFRNSSEKHSDLGLPDADFSKEHPKLCDICRRSETILNPILICSGCKVAVHLNCYRSVKEFTGPWYCELCEDLSFRISGQPSINSWEKPYFVAECGICGGTTGAYRKTSDGHWVHAFCAEWVFESTFRRGQVNAVEGMETVLKGVDTCCICRRKQGVCLKCSYGHCQTTFHPSCARSAGFYMNVRAVSGKLQHRAYCEKHGSEQRAKAESQKHGIEELKGIKQIRVELERLRLLCERIVKREKIKRELVLCSHDILAFKRDHVARSVLVNSPFILPDCSSESATTSLKGNTEGYRSCSEAVQRSDDVTVDSSVSAKHRLRVAVTMDSDPKLDDDCSTSQSHYNHKIPERVQFSGKQVPHRASIISRNLSDDSGWRSKSRKHQETFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNDKRTKQDVFTSEPAEHNG 1439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5351g00008 1439 MobiDBLite consensus disorder prediction 105 126 - -
Pral5351g00008 1439 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 333 457 IPR013083 -
Pral5351g00008 1439 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1096 1207 IPR013083 -
Pral5351g00008 1439 SMART PHD_3 399 455 IPR001965 -
Pral5351g00008 1439 SMART PHD_3 1151 1205 IPR001965 -
Pral5351g00008 1439 SMART PHD_3 1030 1075 IPR001965 -
Pral5351g00008 1439 SMART PHD_3 278 325 IPR001965 -
Pral5351g00008 1439 ProSiteProfiles Extended PHD (ePHD) domain profile. 1096 1205 IPR034732 -
Pral5351g00008 1439 Pfam PHD-zinc-finger like domain 336 454 - -
Pral5351g00008 1439 Pfam PHD-zinc-finger like domain 1098 1204 - -
Pral5351g00008 1439 ProSiteProfiles Zinc finger PHD-type profile. 1028 1077 IPR019787 -
Pral5351g00008 1439 MobiDBLite consensus disorder prediction 183 198 - -
Pral5351g00008 1439 Coils Coil 1225 1245 - -
Pral5351g00008 1439 ProSiteProfiles Extended PHD (ePHD) domain profile. 334 455 IPR034732 -
Pral5351g00008 1439 Coils Coil 924 944 - -
Pral5351g00008 1439 Pfam PHD-finger 292 325 - -
Pral5351g00008 1439 Pfam PHD-finger 1042 1075 - -
Pral5351g00008 1439 SUPERFAMILY FYVE/PHD zinc finger 1020 1075 IPR011011 -
Pral5351g00008 1439 SUPERFAMILY FYVE/PHD zinc finger 270 344 IPR011011 -
Pral5351g00008 1439 CDD ePHD 1099 1204 - -
Pral5351g00008 1439 MobiDBLite consensus disorder prediction 179 198 - -
Pral5351g00008 1439 PANTHER PHD FINGER PROTEINS 103 967 - -
Pral5351g00008 1439 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1007 1080 IPR013083 -
Pral5351g00008 1439 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 269 332 IPR013083 -
Pral5351g00008 1439 ProSitePatterns Zinc finger PHD-type signature. 1031 1074 IPR019786 -
Pral5351g00008 1439 ProSiteProfiles Zinc finger PHD-type profile. 276 327 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5351g00008 Pral-Chr5351 18523 31186 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5351g00008 292 459 C2H2 Transcription Factor Family AT3G14740 31.579 3.80e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5351g00008 - - gmx:100775631 1751.49