Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5345g00010 ATGCTGCCTCACCTGCGACAAAAACCCTTCTTCTTCTTCTTCTTCTTGTTGAGCTTCACAGTCTGGTCATGGTGGACTCTGGACGGCGTCGTTTCAGACCCTCAGACGACTCTGGTGACGATAGGGTGCAGCCAAATCAACGTCAGCGACGTGTCCATCTTCCAAGACAACCTAAACGCAACCTTTCGAAGCATGAGAAGGCAGATCAGCAACCAGAGCAAACACTTCGCCACGGAGCAAGTAGTGGAGGGTAACAACCCCACTTATGGCCTTTTCCAGTGCAGAAACTACCTCTCCATCGCCGACTGTCTCTCTTGCTTTGACTTCGCCGCCGATAAGATTCGACACAACTGCTCCGCCGCCTCCAATGGTGCCCACATCACATACGACGGCTGCTTCATCAGGTACGAGAGCAGTAGCTTCTTTGACCAGTCAACAGACGCGGGCAACAACATTAATTGCGGGAATGAAACAAGAAACTCAACTGAACTTGCTTCAACTGTGCAACAAGTTCTGAGGAATCTGGAAATAGCCACCCCAAGAATCCCAGGTTACTTTGCAGCCACCAAAACGACAGTACCTAACAGCAACGGCTCAAACATTTATGCCTTTGCTCAATGTGTTGAGACTCTCACACAAAGCGGTTGCGACAATTGCTTGAACATTGCCTTGAGAAATTTTCAGATTTGTCTCCCAAACTCAAATGCTAAGACTTTTGATTTCGGCTGCTTCATGAGATATTCCACCACTTCCTTCTTTGCTGACAATCAAACCACTAACATCAATCACTTCTTGAAACAAGGAGATTCAAGCAAGAAGAAGGCCGTTATTATTGGTGGAGTCGTTGGAGGAACATGTTTTATTTTGATTATACTAGCATTATTTGCTTTGTATATGCGATCAAAGTCATCGAAGATGGTTCCTAAAGGTGATATTTTGGGAGCAACTGAGTTAAAAGGCCCTGTTAACTATAGGTATAAAGATCTAAAGTCAGCGACAAAAAATTTCAGTGAAAAATATAAACTAGGAGAACAAGCCTTTGGTGATTTGTACAAGGGTACTTTGAAAAATGGAAAGGTAGTTGCTATCAAGAAATTGGATTTAAGCCAATCCGAACAGATGGAGAAAGATTTTGAGAGTGAAGTGAAGTTGATAAGTAATATTCATCATCGAAATATTGTTCGACTTTTGGGATGTTGCAATAAAGGCCAAGAGAGACTTCTTGTTTACGAGTACATGAAAAACAACAATGTTGGCCAATTCTTATTTGGTGAGAATAAAGGCTCTCTGAGTTGGATGCAACGTTATGCGATAATTTTTGGCACTGCAAGAGGTTTGGCATATTTACATGAGGAATTCCATGTTTGTGTTATACATAGAGATATAAAAGCTAGCAACATCCTATTGGATGATGATTTTCAACCTAAAATTGCTGATTTTGGACTAGCAAGGCTTCTTCCAAGAGACCAATCTCATCTTAATACAAATTTTGTTGGAACAATGGGATATGTGGCACCTGAGTATGCAATGCATGGACAATTATCAGAAAAGGTTGATACTTATAGCTATGGTGTTGTAATCCTAGAAATCATAAGTGGACAAAAAAGTAGTGCATTGAAGGTTGATGATGAAAGTGAATACCTCCTCCAAAGAGCTTGGAAACTTTATGAGAGAGGAATGCATATAGCATTTGTGGACAAAACGTTAGACCCAAACGAGTATGATGCGGAAGAAGTAAAGAAAATAATAGAAATTGGGCTACTTTGCACGCAAGCATCTCCTGCAGCAAGGCCAAGAATGTCTGAAGTTGTTAGAATGCTCAAAAGAAAGAGCTTAATGGAGCACAACCAGCCAACTATGCCTGTCTATGTTGATCCTACTTCTTGGCCCAAAAGAGACACTTCTGTCACTCACAGTTCGTCTTCATCAAATGCTGTTCTCTCTACTTCCATTTTATCAGGAAGGTGA 1968 0.4157 MLPHLRQKPFFFFFFLLSFTVWSWWTLDGVVSDPQTTLVTIGCSQINVSDVSIFQDNLNATFRSMRRQISNQSKHFATEQVVEGNNPTYGLFQCRNYLSIADCLSCFDFAADKIRHNCSAASNGAHITYDGCFIRYESSSFFDQSTDAGNNINCGNETRNSTELASTVQQVLRNLEIATPRIPGYFAATKTTVPNSNGSNIYAFAQCVETLTQSGCDNCLNIALRNFQICLPNSNAKTFDFGCFMRYSTTSFFADNQTTNINHFLKQGDSSKKKAVIIGGVVGGTCFILIILALFALYMRSKSSKMVPKGDILGATELKGPVNYRYKDLKSATKNFSEKYKLGEQAFGDLYKGTLKNGKVVAIKKLDLSQSEQMEKDFESEVKLISNIHHRNIVRLLGCCNKGQERLLVYEYMKNNNVGQFLFGENKGSLSWMQRYAIIFGTARGLAYLHEEFHVCVIHRDIKASNILLDDDFQPKIADFGLARLLPRDQSHLNTNFVGTMGYVAPEYAMHGQLSEKVDTYSYGVVILEIISGQKSSALKVDDESEYLLQRAWKLYERGMHIAFVDKTLDPNEYDAEEVKKIIEIGLLCTQASPAARPRMSEVVRMLKRKSLMEHNQPTMPVYVDPTSWPKRDTSVTHSSSSSNAVLSTSILSGR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5345g00010 655 FunFam Cysteine-rich receptor-like protein kinase 2 149 252 - -
Pral5345g00010 655 Gene3D Phosphorylase Kinase; domain 1 301 412 - -
Pral5345g00010 655 Pfam Protein tyrosine and serine/threonine kinase 340 607 IPR001245 GO:0004672|GO:0006468
Pral5345g00010 655 SMART serkin_6 336 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5345g00010 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Pral5345g00010 655 Pfam Salt stress response/antifungal 159 249 IPR002902 -
Pral5345g00010 655 Pfam Salt stress response/antifungal 46 138 IPR002902 -
Pral5345g00010 655 CDD STKc_IRAK 342 609 - -
Pral5345g00010 655 ProSiteProfiles Gnk2-homologous domain profile. 36 141 IPR002902 -
Pral5345g00010 655 FunFam Cysteine-rich receptor-like protein kinase 2 301 412 - -
Pral5345g00010 655 Gene3D - 148 252 IPR038408 -
Pral5345g00010 655 Gene3D - 35 141 IPR038408 -
Pral5345g00010 655 SUPERFAMILY Protein kinase-like (PK-like) 324 639 IPR011009 -
Pral5345g00010 655 Gene3D Transferase(Phosphotransferase) domain 1 413 623 - -
Pral5345g00010 655 ProSiteProfiles Protein kinase domain profile. 336 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5345g00010 655 ProSiteProfiles Gnk2-homologous domain profile. 145 252 IPR002902 -
Pral5345g00010 655 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 636 - -
Pral5345g00010 655 FunFam Cysteine-rich receptor-like protein kinase 2 413 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5345g00010 Pral-Chr5345 63341 67918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5345g00010 12 655 Receptor kinase-like Gene Family AT1G70520 36.364 6.87e-126 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5345g00010 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5345g00010 - - gmx:100813585 835.099