Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5345g00008 ATGCTGCTGCTAAACCTGCAACAAAATCCCTTGTCCTTCATCTTCTTGTTGAGCTTCACAATCTGGACATGGTGGACTCTTGACGGCGTCGTTTCAGAGCCGCAGCTCAGTTATGTGAAATCAGGGTGCAGCAGCTATAATGTCAGTGACGTGGCCATCTTCAACAAGAACCTAAACGCGTCGATGCGATGCCTGAGAGCGCAGGTCAGCAACCAGAGCAAACACTCCGCGGTGGCGCAGGCAGTGAAGGGTAGCAATCCGGCGTACGGCGTTTTTCAGTGCAGAAACTACCTTTCCATCAAAGACTGCCTCACTTGCTTCGACTTCGCCGCCGTTCATATATACGACAACTGCTCGGTCTCCGCCACTGGTGCCCGGGTCATATACGAAGGTTGCTTCCTCAGGTATGAGAGCAGTATTTTCTTCGACCAGTCCACAGATGGTGGGAACCACATTGTGTGTGGGAATCCTGTGGCTAAAAACTCCACAGAACTTGCTTCAACTGTGCAACAAGGGCTAAAGAATCTGGTAGAAGCAACACCAAGAATACCTGGTTTCTTTGCAGCCACTATAACGCCAGTACCCAACAGTAATGGTTCAAATATTTATGCCTTTGCTCAATGTCTCCAGACTGTCACTCAAAGTGGCTGCCAGGATTGCTTGGAGTCTGGCTTAAGAAATTTTCAGATTTGTATTCCCAACTCAAATGCTAAGATTTTTTATGCTGGTTGCTTCATGAGATACTCCACCTCTGCATTTTTTACTGCTAATCAGACCACCGATATCAAACGCATCTTGAAACAAGGAGATTCAAGCAAGAAGACCATTATTGGTGGAGTCGTTGGAAGTGCATCTTTTATTTTGATTCTTCTTGCATTATTTGCTTTGTATAGACGATCATTGTTCAAGAGAGTTCATAGAGTTGACATTTTGGGAGCAACTGAGTTGAAAGGCCCAGTTAACTACAGGTATAAAGATCTGAAGTCTGCAACAAAAAATTTCAGTGAAGAGAATAAATTAGGAGAAGGAGGTTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAGAAGTAATTGCCATAAAGAAATTGGCTCTAGAGCAATCCAAAAAGATGGATGAAGATTTTGAAAGTGAAGTGAAGCTAATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTTGGATGTTGCAGCAAAGGCCAAGAGAGATTCCTTGTCTACGAGTACATGAAGAACAACAATGTTGGCCAGTTCTTATTTGGTGAAGATAGAGGTTCTCTCAATTGGAAGCAACGTTATGGTATAATTTTAGGCACTGCAAGGGGTTTGGCACATCTTCATGAGGGATTTCACGTTTGCATCATACATAGGGATATAAAGCCCAGCAACATCCTCTTGGATGATGATTTCCAGCCTAAAATTGCAGATTTTGGATTGGCAAGGCTTTTGCCAAGGGACCAATCTCATCTCAATACAAAATTTGTGGGAACAATGGGATACACTGCACCTGAGTATGTAATGCATGGACAATTATCTGAGAAGGTTGACACCTATTGCTATGGTGTTGTAGTCTTAGAAATTATAAGTGGGCAAAAGAGTGGTGAATTAAAGAATGATGATCAAGGCTTGGAAACTGTACGAGAGAGGTATGCACATGGAGTTTGTGGATGA 1674 0.4295 MLLLNLQQNPLSFIFLLSFTIWTWWTLDGVVSEPQLSYVKSGCSSYNVSDVAIFNKNLNASMRCLRAQVSNQSKHSAVAQAVKGSNPAYGVFQCRNYLSIKDCLTCFDFAAVHIYDNCSVSATGARVIYEGCFLRYESSIFFDQSTDGGNHIVCGNPVAKNSTELASTVQQGLKNLVEATPRIPGFFAATITPVPNSNGSNIYAFAQCLQTVTQSGCQDCLESGLRNFQICIPNSNAKIFYAGCFMRYSTSAFFTANQTTDIKRILKQGDSSKKTIIGGVVGSASFILILLALFALYRRSLFKRVHRVDILGATELKGPVNYRYKDLKSATKNFSEENKLGEGGFGDVYKGTLKNGEVIAIKKLALEQSKKMDEDFESEVKLISNVHHRNLVRLLGCCSKGQERFLVYEYMKNNNVGQFLFGEDRGSLNWKQRYGIILGTARGLAHLHEGFHVCIIHRDIKPSNILLDDDFQPKIADFGLARLLPRDQSHLNTKFVGTMGYTAPEYVMHGQLSEKVDTYCYGVVVLEIISGQKSGELKNDDQGLETVRERYAHGVCG 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5345g00008 557 Gene3D Transferase(Phosphotransferase) domain 1 411 554 - -
Pral5345g00008 557 ProSitePatterns Protein kinases ATP-binding region signature. 340 363 IPR017441 GO:0005524
Pral5345g00008 557 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 550 - -
Pral5345g00008 557 Pfam Salt stress response/antifungal 164 250 IPR002902 -
Pral5345g00008 557 Pfam Salt stress response/antifungal 46 138 IPR002902 -
Pral5345g00008 557 Gene3D Phosphorylase Kinase; domain 1 301 410 - -
Pral5345g00008 557 ProSiteProfiles Gnk2-homologous domain profile. 36 141 IPR002902 -
Pral5345g00008 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Pral5345g00008 557 ProSiteProfiles Gnk2-homologous domain profile. 147 253 IPR002902 -
Pral5345g00008 557 SUPERFAMILY Protein kinase-like (PK-like) 318 539 IPR011009 -
Pral5345g00008 557 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 411 540 - -
Pral5345g00008 557 FunFam Cysteine-rich receptor-like protein kinase 2 302 410 - -
Pral5345g00008 557 Gene3D - 35 141 IPR038408 -
Pral5345g00008 557 Gene3D - 150 253 IPR038408 -
Pral5345g00008 557 Pfam Protein kinase domain 335 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5345g00008 557 ProSiteProfiles Protein kinase domain profile. 334 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5345g00008 557 SMART serkin_6 334 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5345g00008 Pral-Chr5345 47483 53241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5345g00008 10 553 Receptor kinase-like Gene Family AT1G70520 36.331 1.76e-106 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5345g00008 Pkinase 2.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5345g00008 - - gmx:100813585 699.508