Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5345g00005 ATGCTGCCTCACCTGCGACAAAAACCCTTCTTCTTCTTGTTGAGCTTCACAGTCTGGTCATGGTGGACTCTGGACGGCGTCGTTTCAGACCCTCAGACGACTCTGGTGACGATAGGGTGCAGCCAAATCAACGTCAGCGACGTGTCCATCTTCCAAGACAACCTAAACGCAACGTTTCGAAGCATGAGAACGCAGATCAGCAACCAGAGCAAACGCTTCGCCACGGAGCAAGCAGTGGAGGGTAACAACCCCACTTATGGCCTTTTTCAGTGCAGAAACTACCTCTCCATCGCCGACTGTCTCTCTTGCTTTGACTTCGCCGCCGATAAGATCCGACACAACTGCTCCGCCGCCTCCAACGGTGCCCACATCACATACGACGGTTGCTTCATCAGGTACGAGAGCAGTAGCTTCTTTGACCAGTCAACAGACGCGGGCAACAACATTAATTGCGGGAATGAAACAAGAAACTCAACTGAACTTGCTTCAACTGTGCAACAAGTTCTGAGGAATCTGGAAATAGCCACACCAAGAATCCCAGGTTACTTTGCAGCCACCAAAACGACAGTACCTAACAGCAACGGCTCAAACATTTATGCCTTTGCTCAATGTGTTGAGACTCTCACACAAAGCGGTTGCGACAATTGCTTGAACATTGCCTTGAGAAATTTTCAGATTTGTCTCCCAAACTCAAATGCTAAGACTTTTGATTTCGGCTGCTTCATGAGATATTCCACCACTTCCTTCTTTGCTGACAATCAAACCACTAACATCAATCACTTCTTGAAACAAGGAGATTCAAGCAAGAAGAAGGCCGTTATTATTGGTGGAGTCGTTGGAGGAACATGTTTTATTTTGATTATACTAGCATTATTTGCTTTGTATATGCGATCAAAGTCATCGAAGATGGTTCCTAAAGGTGATATTTTGGGAGCAACTGAGTTAAAAGGCCCTGTTAACTATAGGTATAAAGATCTAAAGTCAGCGACAAAAAATTTCAGTGAAAAATATAAACTAGGAGAACAAGCCTTTGGTGATTTGTACAAGGGTACTTTGAAAAATGGAAAGGTAGTTGCTATCAAGAAATTGGATTTAAGCCAATCCGAACAGATGGAGAAAGATTTTGAGAGTGAAGTGAAGTTGATAAGTAATATTCATCATCGAAATATTGTTCGACTTTTGGGATGTTGCAATAAAGGCCAAGAGAGGCTTCTTGTTTACGAGTACATGAAAAACAACAATGTTGGCCAATTCTTATTTGGTGAGAATAAAGGCTCTCTGAGTTGGATGCAACGTTATGCGATAATTTTTGGCACTGCAAGAGGTTTGGCATATTTACATGAGGAATTCCATGTTTGTGTTATACATAGAGATATAAAAGCGAGCAACATCCTATTGGATGATGATTTTCAACCTAAAATTGCTGATTTTGGACTAGCAAGGCTTCTTCCAAGAGACCAATCTCATCTTAATACAAATTTTGTTGGAACAATGGGATATGTGGCACCTGAGTATGCAATGCATGGACAATTATCAGAAAAGGTTGATACTTATAGCTATGGTGTTGTAATCCTAGAAATCATAAGTGGACAAAAAAGTAGTGCATTGAAGGTTGATGATGAAAGTGAATACCTCCTCCAAAGAGCTTGGAAACTTTATGAGAGAGGAATGCATATAGCATTTGTGGACAAAACCTTAGACCCAAACGAGTATGATGCGGAAGAAGTAAAGAAAATAATAGAAATTGGGCTACTTTGCACGCAAGCATCTCCTGCAGCAAGGCCAAGAATGTCTGAAGTTGTTAGAATGCTGAAAAGAAAGAGCTTAATGGAGCACAACCAGCCAACTATGCCTGTCTATGTTGATCCTACTTCTTGGCCCAAAAGAGACACTTCTGTCACTCACAGTTCGTCTTCATCAAATGCTGTTCTCTCTACTTCCATTTTATCAGGAAGGTGA 1959 0.4176 MLPHLRQKPFFFLLSFTVWSWWTLDGVVSDPQTTLVTIGCSQINVSDVSIFQDNLNATFRSMRTQISNQSKRFATEQAVEGNNPTYGLFQCRNYLSIADCLSCFDFAADKIRHNCSAASNGAHITYDGCFIRYESSSFFDQSTDAGNNINCGNETRNSTELASTVQQVLRNLEIATPRIPGYFAATKTTVPNSNGSNIYAFAQCVETLTQSGCDNCLNIALRNFQICLPNSNAKTFDFGCFMRYSTTSFFADNQTTNINHFLKQGDSSKKKAVIIGGVVGGTCFILIILALFALYMRSKSSKMVPKGDILGATELKGPVNYRYKDLKSATKNFSEKYKLGEQAFGDLYKGTLKNGKVVAIKKLDLSQSEQMEKDFESEVKLISNIHHRNIVRLLGCCNKGQERLLVYEYMKNNNVGQFLFGENKGSLSWMQRYAIIFGTARGLAYLHEEFHVCVIHRDIKASNILLDDDFQPKIADFGLARLLPRDQSHLNTNFVGTMGYVAPEYAMHGQLSEKVDTYSYGVVILEIISGQKSSALKVDDESEYLLQRAWKLYERGMHIAFVDKTLDPNEYDAEEVKKIIEIGLLCTQASPAARPRMSEVVRMLKRKSLMEHNQPTMPVYVDPTSWPKRDTSVTHSSSSSNAVLSTSILSGR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5345g00005 652 FunFam Cysteine-rich receptor-like protein kinase 2 146 249 - -
Pral5345g00005 652 ProSiteProfiles Protein kinase domain profile. 333 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5345g00005 652 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Pral5345g00005 652 Gene3D Phosphorylase Kinase; domain 1 298 409 - -
Pral5345g00005 652 SUPERFAMILY Protein kinase-like (PK-like) 321 636 IPR011009 -
Pral5345g00005 652 CDD STKc_IRAK 339 606 - -
Pral5345g00005 652 FunFam Cysteine-rich receptor-like protein kinase 2 298 409 - -
Pral5345g00005 652 Pfam Protein tyrosine and serine/threonine kinase 337 604 IPR001245 GO:0004672|GO:0006468
Pral5345g00005 652 ProSiteProfiles Gnk2-homologous domain profile. 142 249 IPR002902 -
Pral5345g00005 652 FunFam Cysteine-rich receptor-like protein kinase 2 410 612 - -
Pral5345g00005 652 Gene3D Transferase(Phosphotransferase) domain 1 410 620 - -
Pral5345g00005 652 SMART serkin_6 333 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5345g00005 652 Gene3D - 145 249 IPR038408 -
Pral5345g00005 652 Gene3D - 32 138 IPR038408 -
Pral5345g00005 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Pral5345g00005 652 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 87 633 - -
Pral5345g00005 652 Pfam Salt stress response/antifungal 156 246 IPR002902 -
Pral5345g00005 652 Pfam Salt stress response/antifungal 43 135 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5345g00005 Pral-Chr5345 26291 30890 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5345g00005 1 652 Receptor kinase-like Gene Family AT1G70520 36.377 7.62e-127 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5345g00005 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5345g00005 - - gmx:100813585 832.787