Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5345g00004 ATGGAAAAGACCAGTCTTGACAGATTCTTATTTGGAAAAAATAAAGGTTCTCTTGATTGGAAGCAACGATATAATATAATTTTAGGAACAGCAAGAGGTTTGGTTTATTTACACGAGGAATTTCATGTTCGTATTATACATAGAGACATAAAGACTAACAACATCCTCTTGGATAATGATTTACAACCTAAAATTGCTGATTTTGGCTTAGCAAGACTTTTACCTGAGGACAAGACTCATCTTAACACAAGATTTGCAGGAACACTAGGATATACAGCCCCTGAATATGCAATTCATGGACAGCTATCAGAAAAAGTTGATGTATATAGTTATGGTGTTATAATCCTAGAAATTGTTAGTGGTAAAAGAAACAATGAATTAATGCCGATGGTGCTGATGAAGGCGGATTCCTCCTTCAAAAAGCTTGGAACTTGTATAAGAGAGGCATACATTTAG 456 0.3465 MEKTSLDRFLFGKNKGSLDWKQRYNIILGTARGLVYLHEEFHVRIIHRDIKTNNILLDNDLQPKIADFGLARLLPEDKTHLNTRFAGTLGYTAPEYAIHGQLSEKVDVYSYGVIILEIVSGKRNNELMPMVLMKADSSFKKLGTCIREAYI 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5345g00004 151 SUPERFAMILY Protein kinase-like (PK-like) 1 128 IPR011009 -
Pral5345g00004 151 ProSiteProfiles Protein kinase domain profile. 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5345g00004 151 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Pral5345g00004 151 Gene3D Transferase(Phosphotransferase) domain 1 1 148 - -
Pral5345g00004 151 SMART serkin_6 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5345g00004 151 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 126 - -
Pral5345g00004 151 Pfam Protein kinase domain 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5345g00004 151 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5345g00004 Pral-Chr5345 23609 25429 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5345g00004 1 126 Receptor kinase-like Gene Family AT1G70520 64.567 1.97e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5345g00004 Pkinase 1.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5345g00004 - - jcu:119370276 222.631