LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5345g00003	ATGCTCCTGCTAAACCTGCAACAAAATCCCTTGTCCTTCATCTTCTTGTTGAGCTTCACAATCTGGACATGGTGGACTCTTGACGGCGTCGTTTCAGAGCCACAGCTCAGTTATGTGAAATCAGGCTGCAGCAGCTATAATGTCAGTGACGTGGCCATCTTCAACAAGAACCTAAACGCGTCGATGCGAAGCCTGAGAGCGCAGGTCAGCAACCAGAGCAAACACTCCGCGGTGGCGCAGGCAGTGAAGGGTAACAATCCGGCGTACGGCGTTTTTCAGTGCAGAAACTACCTTTCCATCAAAGACTGCCTCGCTTGCTTCGACTTCGCCGCCGTTCATATATACGACAACTGCTCCGTCTCCGCCACTGGTGCCCGGGTCATATACGAAGGTTGCTTCCTCAGGTATGAGAGCAGTATTTTCTTCGACCAGTCCACAGATGGTGGGAACCACATTGTGTGTGGGAATCCTGTGGCTAAAAACTCCACAGAACTTGCTTCAACTGTGCAACAAGTGCTAAAGAATCTGGTAGAAGCAACACCAAGAATACCTGGTTTCTTTGCAGCCACTATAACGCCAGTACCCGACAGTAAGGGTTCAAATATTTATGCCTTTGCTCAATGTCTCGAGACTGTCACTCAAAGTGGCTGCCAGGATTGCTTGGAGTCTGGCTTAAGAAATTTTCAGATTTGTATTCCCAACTCAAATGCTAAGATTTTTTATGCTGGTTGCTTCATGAGATACTCCACCTCTGCATTTTTTACTGCTAATCAGACCACTGATATCAAACGCATCTTGAAACAAGGAGATTCAAGCAAGAAGACCATTATTGGTGGGGTCGTTGGAGGTGCATCTTTTATTTTGATTCTTCTTGCATTATTTGCTTTGTATAGACGATCATTGTTCAAGAGAGTTCATAGAGTTGACATTTTGGGAGCAACTGAGTTGAAAGGCCCGGTTAACTACAGGTATAAAGATCTGAAGTCTGCAACAAAAAATTTCAGTGAAGAGAATAAATTAGGAGAAGGAGGTTTTGGTGATGTATACAAGGGTACTCTGAAAAATGGAGAAGTAATTGCCATAAAGAAATTGGCTCTAGAGCAATCCAAAAAGATGGATGAAGATTTTGAAAGTGAAGTGAAGCTAATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTTGGATGTTGCAGTAAAGGCCAAGAGAGATTCCTTGTCTATGAGTACATGAAGAACAACAATGTTGGCCAGTTCTTATTTGGTGGAGATAGAGGTTCTCTCAATTGGAAGCAACGTTATGGTATAATTTTAGGCACTGCAAGGGGTTTGGCATATCTTCATGAGGGATTCCACATTTGCATCGTACATAGGGATATAAAGCCCAGCAACATCCTCTTGGATGATGATTTCCAGCCTAAAATTGCAGATTTTGGATTGGCAAGGCTTTTGCCAAGGGACCAATCTCATCTCAATACAAAATTTGCAGGAACAATGCTTGGAAACTGTACGAGAGAGGAATGCACATGGAGTTTGTGGATGAAACCTTAG	1551	0.4339	MLLLNLQQNPLSFIFLLSFTIWTWWTLDGVVSEPQLSYVKSGCSSYNVSDVAIFNKNLNASMRSLRAQVSNQSKHSAVAQAVKGNNPAYGVFQCRNYLSIKDCLACFDFAAVHIYDNCSVSATGARVIYEGCFLRYESSIFFDQSTDGGNHIVCGNPVAKNSTELASTVQQVLKNLVEATPRIPGFFAATITPVPDSKGSNIYAFAQCLETVTQSGCQDCLESGLRNFQICIPNSNAKIFYAGCFMRYSTSAFFTANQTTDIKRILKQGDSSKKTIIGGVVGGASFILILLALFALYRRSLFKRVHRVDILGATELKGPVNYRYKDLKSATKNFSEENKLGEGGFGDVYKGTLKNGEVIAIKKLALEQSKKMDEDFESEVKLISNVHHRNLVRLLGCCSKGQERFLVYEYMKNNNVGQFLFGGDRGSLNWKQRYGIILGTARGLAYLHEGFHICIVHRDIKPSNILLDDDFQPKIADFGLARLLPRDQSHLNTKFAGTMLGNCTREECTWSLWMKP	516

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5345g00003	516	ProSitePatterns	Protein kinases ATP-binding region signature.	340	363	IPR017441	GO:0005524
	Pral5345g00003	516	Gene3D	-	35	141	IPR038408	-
	Pral5345g00003	516	Gene3D	-	150	253	IPR038408	-
	Pral5345g00003	516	FunFam	Cysteine-rich receptor-like protein kinase 2	149	253	-	-
	Pral5345g00003	516	SUPERFAMILY	Protein kinase-like (PK-like)	318	499	IPR011009	-
	Pral5345g00003	516	FunFam	Os07g0541700 protein	411	498	-	-
	Pral5345g00003	516	SMART	serkin_6	334	514	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5345g00003	516	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	455	467	IPR008271	GO:0004672\|GO:0006468
	Pral5345g00003	516	Gene3D	Phosphorylase Kinase; domain 1	301	410	-	-
	Pral5345g00003	516	ProSiteProfiles	Gnk2-homologous domain profile.	36	141	IPR002902	-
	Pral5345g00003	516	Pfam	Protein kinase domain	335	498	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5345g00003	516	FunFam	Cysteine-rich receptor-like protein kinase 2	302	410	-	-
	Pral5345g00003	516	ProSiteProfiles	Gnk2-homologous domain profile.	147	253	IPR002902	-
	Pral5345g00003	516	Pfam	Salt stress response/antifungal	162	250	IPR002902	-
	Pral5345g00003	516	Pfam	Salt stress response/antifungal	46	138	IPR002902	-
	Pral5345g00003	516	ProSiteProfiles	Protein kinase domain profile.	334	516	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5345g00003	516	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	90	499	-	-
	Pral5345g00003	516	Gene3D	Transferase(Phosphotransferase) domain 1	411	516	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5345g00003	Pral-Chr5345	10819	16586	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5345g00003	52	499	Receptor kinase-like Gene Family	AT1G70530	35.948	2.60e-86	273

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pral5345g00003		Pkinase	4.1e-37	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5345g00003	-		-	gmx:100813585	634.024