Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5344g00003 ATGGAGGATCTGAAAGTAACAATATTAATGGTGGCAGTTCAGGTGCTTGACGTAGGACTGAACACTCTGATCAAAGCAGCCACCGCCGAAGGGATGAGCGACTATGTTTTCGTTGTCTATTCAAAAGCCATGGCTTTCTCTCTTCTTCTTCCATCTTCCTTCTTTTATTACAGAAACCGACCTTCTCCCCCCATCACCTTCTCAATCATCTGCAGAATATTTCTTCTCAGTTGGCTTATTTGTGCAGCGCAGACAATGGTATATGTCGGTATTGGATATAGCTCTCCTGTTCTTTCTTCAGTGATGGCTGATCTCTCCCCAGCTTTTACCTTCCTTCTTGCCATCCTTTTCAGATATGAAAAAGTGGAAGTGAGGCAAGTGAGCAGCCATGCGAAGTGTATAGGGACAGTGTTGTCTATTACAGGAGCGTTAATGGTGACCCTGCACAGAGGAGAGGCAAATAGTGGAGATTCCAAGTTGGAAGACGATTAG 492 0.4472 MEDLKVTILMVAVQVLDVGLNTLIKAATAEGMSDYVFVVYSKAMAFSLLLPSSFFYYRNRPSPPITFSIICRIFLLSWLICAAQTMVYVGIGYSSPVLSSVMADLSPAFTFLLAILFRYEKVEVRQVSSHAKCIGTVLSITGALMVTLHRGEANSGDSKLEDD 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5344g00003 163 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 150 - -
Pral5344g00003 163 PANTHER WAT1-RELATED PROTEIN 7 153 IPR030184 GO:0016020|GO:0022857
Pral5344g00003 163 Pfam EamA-like transporter family 8 147 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5344g00003 Pral-Chr5344 24677 31847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5344g00003 2 151 Nodulin-like Gene Family AT3G28050 52.667 4.04e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5344g00003 - - pcin:129310862 216.853