Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5344g00002 ATGGAGGATCTGAAAGTAACAGTATTAATGGTAGTAGCTCAGGTGCTTGAGGTAGGCATGAACACTCTGATCAAAGCAGCCACCGCCAAAGGGATGAGTGACTATGTCTTCATGGTCTACTCAAATGTCATGGCTTTCTCTCTCCTCCTTCCATCTTCCTTCCTTTATTACAGAAACCGACCTTCTCCCTCCATCACCATCTCAATCTTCTGCAGAATATTTCTTCTCAGCTTGCTCATTTGTGCAGCGCAGACATTATTATATACAGGTATTGGATATAGCTCTCCAGTTCTTGCTTCAGTCATGTCTGATCTCTCCCCAGCTTTTACCTTCCTTCTTGCCATCATTTTAAGATATGAAAAAGTGGAGGTAAGGCAGGTGAGCAGCCATGCAAGGTGTATAGGGACAGTGTTGTCCATTACAGGAGCGTTAACAGTGACACTGTACAGAGGAGAGGCAAATGGGGGAGATTCCAAGGTGGAAGATGGGTGGCTTCTCGGAGGCATTTTACTTGCACTCGGCAACTTCTGTGTTTCAGTCATTTTTAACGTCAAGACATGGATAATGAAGGAGTATCCTGAAGTTGTGATGGTGGCAACCATATCATGCGGCTTTGTGGCAGTGTTATCCGCCATTGTTGCTGTCATTGCTGAGATAAATAATGCTCAAGCATGGACTCTTCGCCCTGATCTGGAGCTGGCCGCTATATTATATTCTAGCATCATTGTCGGATTAGTGAGAAGCATGATGTATATATGGGCATGCGGAAGGAAGGGACCTGTCTACGTCGCCATGTTTTCTCCTTTAGGGATGATCTTCGCTGTTGCCATGGGACTTATCTTTCTCGGCGAATCTGTTTCTCTTGGAAGTGTGATTGGTGGTGGGGTGATAGCTATTGGGTTTTATGGCGTTCTATGGGGTCAGGCTCAGCAGGAAAAGATGGCTTTTGAGAAACAAGCAATTTGTAGCTGTGTGTCTTCATCATCGTCTTCTTCTTCTAATAATGCAGGGCCTCTTCTTCAGAACCAACGTGTGTGA 1038 0.4518 MEDLKVTVLMVVAQVLEVGMNTLIKAATAKGMSDYVFMVYSNVMAFSLLLPSSFLYYRNRPSPSITISIFCRIFLLSLLICAAQTLLYTGIGYSSPVLASVMSDLSPAFTFLLAIILRYEKVEVRQVSSHARCIGTVLSITGALTVTLYRGEANGGDSKVEDGWLLGGILLALGNFCVSVIFNVKTWIMKEYPEVVMVATISCGFVAVLSAIVAVIAEINNAQAWTLRPDLELAAILYSSIIVGLVRSMMYIWACGRKGPVYVAMFSPLGMIFAVAMGLIFLGESVSLGSVIGGGVIAIGFYGVLWGQAQQEKMAFEKQAICSCVSSSSSSSSNNAGPLLQNQRV 345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral5344g00002 345 MobiDBLite consensus disorder prediction 326 345 - -
Pral5344g00002 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 212 309 - -
Pral5344g00002 345 PANTHER WAT1-RELATED PROTEIN 6 321 IPR030184 GO:0016020|GO:0022857
Pral5344g00002 345 Pfam EamA-like transporter family 166 305 IPR000620 GO:0016020
Pral5344g00002 345 Pfam EamA-like transporter family 9 146 IPR000620 GO:0016020
Pral5344g00002 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 149 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral5344g00002 Pral-Chr5344 9237 13534 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5344g00002 10 314 Nodulin-like Gene Family AT5G40240 41.745 3.26e-80 247
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5344g00002 - - pcin:129310862 429.098