Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5340g00014 ATGGCTTCTTCTCCTTCATCCTCCTCGCTTTGGACTCTTCAACAAGAGAAGACAGTTGTCCTAACACTATATATAGTCGCTTTTTTATCATTCATTCCCAGCTCCACAGGATGCCCCTACACTTCCATTTTCAGCTTCGGCGACTCACTTGCTGATACCGGAAACTTGTTTTTCAGCTTCCAACCACCGCGGCGCCACCATTGCTCCCGCCCTCCCTACGGCAAAACCTACTTCGGTCACCCCACCGGAAGATGCTCCGATGGCCGTCTTATCATTGATTTCATCGCTGAGTCTTTAAGCATACCATCAGTGAAACCATATGAGGGAATTAAGAATGGTCGAGTAAGAAATTGGAACAAAGAGGAGGGAGTGAATTTTGCAGTTGCGGGAGCAACGGCTTTGAATGTAAGTTTCTTTGAAGAGAGAGGTATTTATGCTGTCAGTACTAATGATTCTCTTAGAGTTCAACTGGGATGGTTCAAGGAGTTTTTGCCTTCTATATGCAATTCTTCCTCAAGCTGCAAGAAAGCGTTTGAGAAGTCACTCTTTCTGGTGGGAGAAATTGGTGGCAATGACTTTAATAGACCTTTTGCCTTGCGAAGGACTTTAGCGGAGATCAAAACTTACGTGCCTCATGTGATCAATGCAATCTCTTCAACGATAGAAGATTTGATAGATCTAGGAGCTCAAATGCTCATTGTTCCTGGGAATTTCCCAATAGGATGCAATGCGTTCTATTTAACAATGTATGAGAGTAACTATAAGAATGACTACGACGAAGCTGGTTGCTTGGATTGGCTGAACAAGTTTGCTGAATACTACAATCACAGGCTTCAAGCTGAACTAAATCGCCTTCAACAGCTTCATCCTCATGCCAATATCATATATGCTGATTATTATAACGCTGCATTACCACTCTATCATTCTCCCACAAAATTTGGTTTTACGGGTTTGAAAGCTTGTTGCGGAGCTGGAGGGGCATACAATTGCGGTGCTTCAAAAAGATGTGGAAGTGAAGGAGTGAAGGCTTGTGATGATCCTTCGAAGTACATAAGCTGGGATGGTGTTCATTTGACAGAAGCTGCGTATAGATTGATCTCAAGATATTTATTAAAAGGATCCTATACTGCTCCTAAATTTGATGACTTGTGCTTGAAGAACAAAGCTTTTGAAAGTTTTAACAGCCTTTGA 1191 0.424 MASSPSSSSLWTLQQEKTVVLTLYIVAFLSFIPSSTGCPYTSIFSFGDSLADTGNLFFSFQPPRRHHCSRPPYGKTYFGHPTGRCSDGRLIIDFIAESLSIPSVKPYEGIKNGRVRNWNKEEGVNFAVAGATALNVSFFEERGIYAVSTNDSLRVQLGWFKEFLPSICNSSSSCKKAFEKSLFLVGEIGGNDFNRPFALRRTLAEIKTYVPHVINAISSTIEDLIDLGAQMLIVPGNFPIGCNAFYLTMYESNYKNDYDEAGCLDWLNKFAEYYNHRLQAELNRLQQLHPHANIIYADYYNAALPLYHSPTKFGFTGLKACCGAGGAYNCGASKRCGSEGVKACDDPSKYISWDGVHLTEAAYRLISRYLLKGSYTAPKFDDLCLKNKAFESFNSL 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5340g00014 396 Pfam GDSL-like Lipase/Acylhydrolase 43 369 IPR001087 GO:0016788
Pral5340g00014 396 CDD SGNH_plant_lipase_like 41 374 IPR035669 -
Pral5340g00014 396 Gene3D SGNH hydrolase 33 374 IPR036514 -
Pral5340g00014 396 SUPERFAMILY SGNH hydrolase 120 372 - -
Pral5340g00014 396 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 25 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5340g00014 Pral-Chr5340 330459 332771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5340g00014 17 368 Pollen Coat Proteome AT1G75930 29.155 1.84e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5340g00014 - - gmx:100816865 492.271