Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5339g00006 ATGCCTTCTTCTTCTTCCTTTTGGACTGTATCTTCCATAAACCTTCAATTCTTCACCAGAATCAGACGTTTTCTTCAATCCAAATCTTCTCGGAAGCGCAAGCAAAGGTCCGATCAATTTCGCGTATCAAAATCCAAATCAGAGAGCAACGACAAGAAGAAGAATGAGAAGGCAGAGGTTGAAAAGCTTGAAACGATTAAAGTTATGGAGAAACAGAGTGAGAGTATTGAGGAGGAGGAGGAGGGGAAGGAAGAGTTTTGTGAGATTTTGCTGCAGCGGTCTGTGAAGAAGCTCCACTTTGGTGATTGGGAGGAGAAGGAGATTGCAGCGAAAGAGATTGAAACTATGGCGAAACGCGATGTCAGGGCTCGCAAGCTGATCATGGAGCTCGGCGTCGTGCCGGTGCTCGTCTCTATGGTGGCTTCCGATGCATCCAGCCGCCGGAGTTCTGCCATCACGGCGTTGATTCAGCTCGCTGATGGTAGCTTCACGAACAAGGCCATGATAGTGGAGGCAGGAATATTATCCAAATTACCTAAGAGGACTGACCTTGTGGACGAATCAACAAGAAGTCAAATTGCAGAGTTGCTTCTGTCATTATCATCTTTGGCAACCACACAATTCCCTTTTGCATCACTGGACTTTCTCCCATTTCTCAGAGACATTCTGCGGTCAAACTCAAGCTTTGACACAAAAGAGTTATGCCTAGGAGCCTTATTCAATCTCTCAACTGTCTTAGAGAATGCAGGGCCCTTGGTTTCTGGTGGGTTTGTCCCTATTCTTTTAGAACTTTCCTCAGAAAAACAAGTTTCTGAGAAGGCTCTGGCCTCTCTGGGAAACTTAATTGTTACACTGATGGGGAAGAAAGCAATAGAAGAAAGCTCAATGGTGCCAGAGAGCTTGATAGATATTTTGTCGTGGGAAGATAAGCCAAAATGTCAAGAGATTTCTGCTTATATTTTGATGATTCTTGCTCATCAAAGCTCATCACAGAGACAGAAAATGGCCAACGCAGGGATTGTCCATGTGCTTCTTGAAGTGGTTCTCCTAGGAAGCACTTTGGCTCAGAAGAGAGCGTCAAAACTCTTGCAATGGTTTAAGGATGAAAGGCAAGTGAGAATGGGCCCACATTCGGGCCCACAAACATCCAGAACAGTCATGTCCATGGGTTCACCTATGAATGAAATGGAAGCAAGAGAAGGAAAGAGAATGATGAAGAGTTTGGTCAAAGAGAGTTTATATAGGAATATGGAAACAATTACAGAGAGGGCAAATATTGCTGCTGCAGAATCTTCTTCTAAGCTCAAGTCTTTAATAATCAGCACAAGTTCCAAGAGTTTGCCTTACTGA 1350 0.4415 MPSSSSFWTVSSINLQFFTRIRRFLQSKSSRKRKQRSDQFRVSKSKSESNDKKKNEKAEVEKLETIKVMEKQSESIEEEEEGKEEFCEILLQRSVKKLHFGDWEEKEIAAKEIETMAKRDVRARKLIMELGVVPVLVSMVASDASSRRSSAITALIQLADGSFTNKAMIVEAGILSKLPKRTDLVDESTRSQIAELLLSLSSLATTQFPFASLDFLPFLRDILRSNSSFDTKELCLGALFNLSTVLENAGPLVSGGFVPILLELSSEKQVSEKALASLGNLIVTLMGKKAIEESSMVPESLIDILSWEDKPKCQEISAYILMILAHQSSSQRQKMANAGIVHVLLEVVLLGSTLAQKRASKLLQWFKDERQVRMGPHSGPQTSRTVMSMGSPMNEMEAREGKRMMKSLVKESLYRNMETITERANIAAAESSSKLKSLIISTSSKSLPY 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5339g00006 449 Gene3D - 22 373 IPR011989 -
Pral5339g00006 449 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 6 449 - -
Pral5339g00006 449 MobiDBLite consensus disorder prediction 27 60 - -
Pral5339g00006 449 SUPERFAMILY ARM repeat 93 365 IPR016024 -
Pral5339g00006 449 Coils Coil 46 66 - -
Pral5339g00006 449 MobiDBLite consensus disorder prediction 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5339g00006 Pral-Chr5339 73428 91034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5339g00006 97 364 U-box Gene Family AT3G46510 28.571 1.24e-18 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5339g00006 - - gmx:100813828 533.872