Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5339g00002 ATGCTGATTATTATTGTTGAAATCTTGTGTACAGCAATTCTCTGGTCTGCAGCTAAATTTGCACTGGGTGCCCCTTGTGCTTTAATATTCTTGATTATCCGATGGAGAAGAAGGCATCAATCTTATTATGACAATGTTGAGGACTTCCTCCGAAATAACAGTAATCTGATGCCCATCAAGTACTCTTACTCAGAGATCAAGAAAATGACCAATGGCTTCAAACACAAGTTGGGCGAGGGAGGCTACGGTTATGTGTATAAAGGTAAGCTTCGAAGCAATCGCGATGTAGCCGTCAAGTTACTGACAAAGTCCAAAGCCAATAATGCACAAGATTTCATTAGTGAAGTTGCCACTATTGGCAGGATTCATCATGTCAATGTGGTGCAGCTGATTGGATTCTGCACTGAAAGAAGTAAGCGAGCTCTTGTTTATGAATTTATGCCTAATGGATCACTTGACAAGTACATATTCTTGGAGAGACAAAGCAACACGCCCATCAATTACGAGAAAATATTTAACATTTCTCTTGGGATTGCTCGAGGAATTGAGTATTTACATCGAGGATGTGATATGCAAATTCTACACTTTGATATCAAACCTCACAATATCCTTCTTGATGAAAATTTTAATCCAAAGATTTCAGATTTCGGATTAGCTAAGTTGTACCCATTAGATAATAGTATTGTGTCTCTGACAAATGCAAGAGGAACATTTGGATACATGGCTCCTGAATTCTTGTACAAGAACATTGGAGGAATATCACACAAAGCTGATGTTTATAGTTTTGGGATGCTATTGATGGAAATGGCTGGCAGAAGGAAGAACTCGAATGTCATTGAGCATTCCTGGCAGACCTATTTTGCTAAATGGGTTTATGATCAATTTGAGGAATCAATAGAGGGGAGCAATATCTCAGATGAGGAAAGAGGAATTGCAAAAAAGATGATGATAATAGCTTCACATTGCATACAGATGTATCCTAATGATCGACCCTCGATGAAGAATGTGTTAGAGATGCTTGAGGGAGAAATGGAGCTTCAAGAGGCTCTTCCTCCCTAA 1059 0.389 MLIIIVEILCTAILWSAAKFALGAPCALIFLIIRWRRRHQSYYDNVEDFLRNNSNLMPIKYSYSEIKKMTNGFKHKLGEGGYGYVYKGKLRSNRDVAVKLLTKSKANNAQDFISEVATIGRIHHVNVVQLIGFCTERSKRALVYEFMPNGSLDKYIFLERQSNTPINYEKIFNISLGIARGIEYLHRGCDMQILHFDIKPHNILLDENFNPKISDFGLAKLYPLDNSIVSLTNARGTFGYMAPEFLYKNIGGISHKADVYSFGMLLMEMAGRRKNSNVIEHSWQTYFAKWVYDQFEESIEGSNISDEERGIAKKMMIIASHCIQMYPNDRPSMKNVLEMLEGEMELQEALPP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5339g00002 352 PANTHER RUST RESISTANCE KINASE LR10-RELATED 40 347 IPR045874 GO:0004672
Pral5339g00002 352 Pfam Protein kinase domain 74 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5339g00002 352 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524
Pral5339g00002 352 FunFam serine/threonine-protein kinase PBS1-like 39 146 - -
Pral5339g00002 352 SUPERFAMILY Protein kinase-like (PK-like) 52 341 IPR011009 -
Pral5339g00002 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Pral5339g00002 352 SMART serkin_6 71 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5339g00002 352 Gene3D Transferase(Phosphotransferase) domain 1 147 349 - -
Pral5339g00002 352 Gene3D Phosphorylase Kinase; domain 1 46 146 - -
Pral5339g00002 352 FunFam PR5-like receptor kinase 147 350 - -
Pral5339g00002 352 ProSiteProfiles Protein kinase domain profile. 71 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5339g00002 Pral-Chr5339 23937 25314 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5339g00002 60 351 Receptor kinase-like Gene Family AT5G38280 54.153 1.51e-107 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5339g00002 Pkinase 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5339g00002 - - tpra:123914142 473.011