Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5339g00001 ATGATATACTGGACCTTCATAATCATCTTCCTTGCCTTCTCTGCTTTCCTTTTATACACTAATATCGATAGACTTATCTCTGGCCAAACAGTTACTGAATCCTGCGGACATGTGTTCAACGCCTCCATCACAAATAGAAACTATCCCTTCAATAGTTGTAGCGATCCGAGTTACGAACTAGTATGTGAGAACAACAGAAATGCGTTGTATTTAAACTATGGGAGGCACTTAGTAGAGGCCATTTATGCTGCTAACTCCGCCACAACTCTCCAATCCATCACCGCCGGAGTTGACAGCAACAACTGTTCTGCGATCTCTCGTCATTCTCTCACATATCACAACTTCAGCCAAGCTTTCACAGCCAAAGAGACAGAACTAGACTCCAAAAATTACAGCTTCACTTACTATGTGGGAGGATTAGTGTTTGTCAGCTGCCAACATCCACTCTCTCCTGATCTGCATACGGATATTGTGGAACCTTGTGCGAGTGATGCGCCAAGAACGCGTCATTCTTATGTGCTGCCGTGGCATGCAAGGGTGTCTGATGTGGAAGAGTCCTGCAAAATAGATTTGATGGTGAAGGTGGTGCCATGGGGACCAATGACATGTAATGAGAACTGTTCATATCCGAAAGTTCACAGCCAAGAGGTAAAGGGGATACACATCACCTGGCGACCAAATCGTTGTGGGGAGTGGGAAGGAGAGAAAGGTGACTGCTGGTTTGAAAATGCCACTAATATGGTTCTTTGTCGAGACCAATACGCAGAATTTTCTCTTCCCTTGTTTCGCGGCTTTGCAATAGTCGTGACTTCTATAGCAAAATTTGCTTTGGGATTCCCAATTGTTGTGGGTTTTCTAATATATAAAATGAGAAGGAGGCATTTATCTGAGTATGATGACATTGAGGATTTCCTAAGAAGTCACAGCAATTTAGTGCCCATTAAATACTCTTACTCTGACATAAGAAGAATGACAAAAAATTTCAAGCACAAGTTAGGAGAAGGGGGTTATGGTTCTGTATATAAAGGAAAGCTTCGAAGCAAGCGTGATGTGGCTGTTAAGCTATTAGGCAAGTCAACAACAGATGGGCATGATTTCATCAATGAAGTTTCCACCATTGGAACTATTCGTCATGTAAATGTGGTGCAATTGATAGGATTTTGTGCAGAGAGAAGAAAGCAAGCTCTTGTTTATGAGTTCATGCCAAACGGATCTTTAGATAAATACATACTTTCTGAGCATGAAAAATCATCAATAAATTATGAGAAGATCAATGAGATTTCTTTAGGGGTGGCTCGTGGGATTGAGTACCTACATCAAGGCTGCGACAAGCAAATCCTACACTTTGACATCAAACCTCACAATATTCTTCTTGATGAGAATTTTTCTCCCAAGATTTCAGACTTTGGATTGGCAAAACTATATCCAACAGATAAAAGTATTGTGTCTCTAACTGCAGCTAGAGGCACAATGGGATACATGGCTCCTGAATTGTTGTACAAAAACATTGGAGGCATCTCACACAAGGCTGATGTTTATAGTTTTGGGATGATGCTGATGGAAATGGCAGGAAGAAGAAAGAACCATGATGTTGTGCAGAATTCATGGCAGACTTACTTTGCGAAATGGGTTCATGATCAGTTTGAAGAAACAATATTTAAAAGCAATGCCACAGAAGAAGAGAAGAAGATAGCCCTGAAAATGATTACAGTTGCTTTTACTTGCATACAGCTGAGCCCAAGTGATCGCCCCTCAATGGGCAGAGTAGTGGAGATGCTTCAAGGGGATGTTGACGGCTCAGAGGTCTTCAGAGCATAG 1818 0.4169 MIYWTFIIIFLAFSAFLLYTNIDRLISGQTVTESCGHVFNASITNRNYPFNSCSDPSYELVCENNRNALYLNYGRHLVEAIYAANSATTLQSITAGVDSNNCSAISRHSLTYHNFSQAFTAKETELDSKNYSFTYYVGGLVFVSCQHPLSPDLHTDIVEPCASDAPRTRHSYVLPWHARVSDVEESCKIDLMVKVVPWGPMTCNENCSYPKVHSQEVKGIHITWRPNRCGEWEGEKGDCWFENATNMVLCRDQYAEFSLPLFRGFAIVVTSIAKFALGFPIVVGFLIYKMRRRHLSEYDDIEDFLRSHSNLVPIKYSYSDIRRMTKNFKHKLGEGGYGSVYKGKLRSKRDVAVKLLGKSTTDGHDFINEVSTIGTIRHVNVVQLIGFCAERRKQALVYEFMPNGSLDKYILSEHEKSSINYEKINEISLGVARGIEYLHQGCDKQILHFDIKPHNILLDENFSPKISDFGLAKLYPTDKSIVSLTAARGTMGYMAPELLYKNIGGISHKADVYSFGMMLMEMAGRRKNHDVVQNSWQTYFAKWVHDQFEETIFKSNATEEEKKIALKMITVAFTCIQLSPSDRPSMGRVVEMLQGDVDGSEVFRA 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5339g00001 605 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Pral5339g00001 605 ProSiteProfiles Protein kinase domain profile. 326 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5339g00001 605 SUPERFAMILY Protein kinase-like (PK-like) 307 593 IPR011009 -
Pral5339g00001 605 Gene3D Phosphorylase Kinase; domain 1 304 400 - -
Pral5339g00001 605 PANTHER RUST RESISTANCE KINASE LR10-RELATED 298 596 IPR045874 GO:0004672
Pral5339g00001 605 Gene3D Transferase(Phosphotransferase) domain 1 401 601 - -
Pral5339g00001 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Pral5339g00001 605 SMART serkin_6 326 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5339g00001 605 Pfam Protein kinase domain 329 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5339g00001 605 FunFam serine/threonine-protein kinase PBS1-like 296 400 - -
Pral5339g00001 605 FunFam PR5-like receptor kinase 401 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5339g00001 Pral-Chr5339 9039 15197 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5339g00001 315 602 Receptor kinase-like Gene Family AT5G38280 51.515 5.69e-101 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral5339g00001 Pkinase 1.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5339g00001 - - tpra:123914142 574.318