Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5338g00005 ATGAATGGAACGGACGCGATCAAGTATGGATTTTCCCGTCAGGTTCCAAGTGCTGCGGTCAACTCAGATACGCATGAGGAAGTTGCCATCAAGAAGATTGGCAACGCATTTGACAACATAATTGATGCTAAAAGGACATTGAGAGAAATTAAGCTTCTTCGCTACATGGACCATGAAAATATCATTGCCATTAAGGATATAATAAGACCGCCCAAGAAGGAGACCTTCAATGATGTATACATAGTTTATGAATTGATGGACACTGATCTTCAACAGATAATTCGTTCTGGCCAAACTCTTACCGATGACCATTGTCAGTACTTTCTATACCAGCTGTTACGGGGTCTGAAATATGTGCATTCAGCCAATGTCTTGCACCGTGATCTTAAACCCAGCAATTTACTTCTGAATTCAAATTGTGACCTTAAAATTGGGGACTTTGGTTTGGCAAGGACAACAACTGAAACTGATTTCATGACGGAATATGTAGTCACTCGGTGGTACCGAGCACCAGAACTGCTCCTCAATTGTTCAGAGTACACATCTGCTATTGATGTTTGGTCTGTCGGTTGCATCTTTGGTGAAATTATGACCAGAGAACCCTTGTTTCCTGGAAAGGACTATGTTCATCAACTAAGGCTTATCACAGAGTTAATAGGTTCTCCTGACGATGCCAGCCTTGGATTTCTCCGAAGTGAAAATGCCAGAAGATACGTTAGACAACTTCCACAATGCAGGAAGCAAAAATTCTCGGCCAGATTCCCTAATATGTCTCCCGAGGCACTGGATCTTCTAGAAAAAATGCTCATCTTTGATCCCAACAAACGCATTACAGTTGATGAAGCACTATGTCACCCATATCTTTCATCACTCCATGACATGAATGATGAGCCAGTCTGTCCGAGGCCATTCAGTTTCGATTTTGAGCAGCCAATTTGTACTGAAGAGCAAATCAAGGAGCTCATCTGGAGGGAATCAGTGAAGTTCAATCCTGATCCAGCGCATCACTAG 1011 0.4243 MNGTDAIKYGFSRQVPSAAVNSDTHEEVAIKKIGNAFDNIIDAKRTLREIKLLRYMDHENIIAIKDIIRPPKKETFNDVYIVYELMDTDLQQIIRSGQTLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNSNCDLKIGDFGLARTTTETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSENARRYVRQLPQCRKQKFSARFPNMSPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHDMNDEPVCPRPFSFDFEQPICTEEQIKELIWRESVKFNPDPAHH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5338g00005 336 Gene3D Transferase(Phosphotransferase) domain 1 86 315 - -
Pral5338g00005 336 FunFam Mitogen-activated protein kinase 86 315 - -
Pral5338g00005 336 ProSitePatterns MAP kinase signature. 37 140 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pral5338g00005 336 ProSiteProfiles Protein kinase domain profile. 1 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5338g00005 336 Pfam Protein kinase domain 18 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5338g00005 336 Gene3D Phosphorylase Kinase; domain 1 15 325 - -
Pral5338g00005 336 SUPERFAMILY Protein kinase-like (PK-like) 19 297 IPR011009 -
Pral5338g00005 336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pral5338g00005 336 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 18 289 - -
Pral5338g00005 336 FunFam Mitogen-activated protein kinase 5 96 - -
Pral5338g00005 336 SMART serkin_6 9 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5338g00005 Pral-Chr5338 37334 41956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5338g00005 18 331 MAP Kinase Gene Family AT4G01370 84.713 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pral5338g00005 Pkinase 3.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5338g00005 - K20600 cave:132173448 608.216