Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5338g00004 ATGACCTCCAAAGAGTCAAGTTCTGCTGCTTCAACCGATAGTAAAATCAAAAGGGTTCTTACTCATGGGGGTAGATACGTGCAGTACAATGTTTACGGCAATTTGTTCGAGGTCTCCTCCAAGTACGTGCCTCCCATTCGCCCAATCGGTAGAGGCGCTAACGGTATCGTTTGTGCTGCGGTCAACTCAGATACGCATGAGGAAGTTGCCATCAAGAAGATTGGCAACGCATTTGACAACATAATTGATGCTAAAAGGACATTGAGAGAAATTAAGCTTCTTCGCTACATGGACCATGAAAATATCATTGCCATTAAGGATATAATAAGACCGCCCAAGAAGGAGACCTTCAATGATGTATACATAGTTTATGAATTGATGGACACTGATCTTCAACAGATAATTCGTTCTGGCCAAACTCTTACCGATGACCATTGTCAGTACTTTCTATACCAGCTGTTACGGGGTCTGAAATATGTGCATTCAGCCAATGTCTTGCACCGTGATCTTAAACCCAGCAATTTACTTCTGAATTCAAATTGTGACCTTAAAATTGGGGACTTTGGTTTGGCAAGGACAACAACTGAAACTGATTTCATGACGGAATATGTAGTCACTCGGTGGTACCGAGCACCAGAACTGCTCCTCAATTGTTCAGAGTACACATCTGCTATTGATGTTTGGTCTGTCGGTTGCATCTTTGGTGAAATTATGACCAGAGAACCCTTGTTTCCTGGAAAGGACTATGTTCATCAACTAAGGCTTATCACAGAGTTAATAGGTTCTCCTGACGATGCCAGCCTTGGATTTCTCCGAAGTGAAAATGCCAGAAGATACGTTAGACAACTTCCACAATGCAGGAAGCAAAAATTCTCGGCCAGATTCCCTAATATGTCTCCCGAGGCACTGGATCTTCTAGAAAAAATGCTCATCTTTGATCCCAACAAACGCATTACAGTTGATGAAGCACTATGTCACCCATATCTTTCATCACTCCATGACATGAATGATGAGCCAGTCTGTCCGAGGCCATTCAGTTTCGATTTTGAGCAGCCAATTTGTACTGAAGAGCAAATCAAGGAGCTCATCTGGAGGGAATCAGTGAAGTTCAATCCTGATCCAGCGCATCACTAG 1134 0.4295 MTSKESSSAASTDSKIKRVLTHGGRYVQYNVYGNLFEVSSKYVPPIRPIGRGANGIVCAAVNSDTHEEVAIKKIGNAFDNIIDAKRTLREIKLLRYMDHENIIAIKDIIRPPKKETFNDVYIVYELMDTDLQQIIRSGQTLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNSNCDLKIGDFGLARTTTETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSENARRYVRQLPQCRKQKFSARFPNMSPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHDMNDEPVCPRPFSFDFEQPICTEEQIKELIWRESVKFNPDPAHH 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5338g00004 377 SUPERFAMILY Protein kinase-like (PK-like) 46 338 IPR011009 -
Pral5338g00004 377 Gene3D Transferase(Phosphotransferase) domain 1 127 356 - -
Pral5338g00004 377 ProSitePatterns Protein kinases ATP-binding region signature. 49 73 IPR017441 GO:0005524
Pral5338g00004 377 ProSiteProfiles Protein kinase domain profile. 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5338g00004 377 FunFam Mitogen-activated protein kinase 127 356 - -
Pral5338g00004 377 SMART serkin_6 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5338g00004 377 ProSitePatterns MAP kinase signature. 78 181 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pral5338g00004 377 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 41 330 - -
Pral5338g00004 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Pral5338g00004 377 Pfam Protein kinase domain 47 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5338g00004 377 Gene3D Phosphorylase Kinase; domain 1 26 366 - -
Pral5338g00004 377 CDD STKc_TEY_MAPK 36 372 - -
Pral5338g00004 377 PRINTS ERK3/4 MAP kinase signature 213 224 IPR008350 GO:0004707|GO:0005524|GO:0006468
Pral5338g00004 377 PRINTS ERK3/4 MAP kinase signature 50 68 IPR008350 GO:0004707|GO:0005524|GO:0006468
Pral5338g00004 377 PRINTS ERK3/4 MAP kinase signature 124 138 IPR008350 GO:0004707|GO:0005524|GO:0006468
Pral5338g00004 377 FunFam Mitogen-activated protein kinase 28 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5338g00004 Pral-Chr5338 36943 41956 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5338g00004 3 372 MAP Kinase Gene Family AT4G01370 83.019 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pral5338g00004 Pkinase 9.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5338g00004 - - cave:132173448 699.508