Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5337g00086 | ATGATCCTTTCCGCAGTACTTTTCCAGAATTCTCAGATACCACGATGGTGCTTGATGAATTGGGAGAGCTTTACAAGCCTTTCTATCCTGTTTTACAGCCTCTTTCAACACAAACAATCACAACGACTTCCGTACCCATCCCTAAACAAGTCAAACCATCAGAGGAAGCACAAGATTTGCACGAATCTCCAAGCAGAAGAAGGTGAGAATATGTTCAGCAAGAAGAACCAGAACAAGAGAATAGTGAAGCAGGTGAGAGCAGATGGATTATGCGACGCATGGGCATGGCGTAAATACGGGCAGAAACCGATCAAGGGATCGCCATATCCCAGAAGCTATTACAGATGCAGCAGCTCCAAAGGATGCTTGGCGAGGAAACAAGTGGAAAGGAGCCATTTGGATCCTGAAGTTTTCATAGTGACTTATACTGCAGAACACAGTGATCATCACCCACCTCGCTCCTCTCGCAAAACTAGGCACTCCAATATTCCACCTGAAACTACACAACACACGTCTTCTCCTTTGGAAGACTCCATTGAAGAAGATGAGCCAATTGTGTCCAGTGGGTCAAGCCAGCGCTTGAACAAAGATGCTGACATTGGTCAGATTGTCACAGATCAGAATATATTAACCAATGGTGATTGGTTTCCAAGTATAGACGAACTTGACGGGCTTAGCCAAGAATTTGCATTAGATGGTTACCTTTACGGCCAATCCTGA | 720 | 0.4486 | MILSAVLFQNSQIPRWCLMNWESFTSLSILFYSLFQHKQSQRLPYPSLNKSNHQRKHKICTNLQAEEGENMFSKKNQNKRIVKQVRADGLCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPEVFIVTYTAEHSDHHPPRSSRKTRHSNIPPETTQHTSSPLEDSIEEDEPIVSSGSSQRLNKDADIGQIVTDQNILTNGDWFPSIDELDGLSQEFALDGYLYGQS | 239 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5337g00086 | 239 | MobiDBLite | consensus disorder prediction | 184 | 198 | - | - | |
Pral5337g00086 | 239 | SUPERFAMILY | WRKY DNA-binding domain | 85 | 151 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pral5337g00086 | 239 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 48 | 183 | IPR044810 | GO:0003700 | |
Pral5337g00086 | 239 | MobiDBLite | consensus disorder prediction | 143 | 198 | - | - | |
Pral5337g00086 | 239 | Gene3D | WRKY domain | 74 | 144 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pral5337g00086 | 239 | FunFam | WRKY transcription factor 22 | 74 | 144 | - | - | |
Pral5337g00086 | 239 | Pfam | WRKY DNA -binding domain | 92 | 147 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pral5337g00086 | 239 | ProSiteProfiles | WRKY domain profile. | 85 | 151 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pral5337g00086 | 239 | SMART | WRKY_cls | 90 | 151 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5337g00086 | Pral-Chr5337 | 516291 | 517333 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5337g00086 | 74 | 204 | WRKY Transcription Factor Family | AT5G52830 | 51.724 | 1.24e-36 | 130 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Pral5337g00086 | WRKY | 7.4e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5337g00086 | K13426 | - | gmx:102667104 | 155.992 |