Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5337g00086 ATGATCCTTTCCGCAGTACTTTTCCAGAATTCTCAGATACCACGATGGTGCTTGATGAATTGGGAGAGCTTTACAAGCCTTTCTATCCTGTTTTACAGCCTCTTTCAACACAAACAATCACAACGACTTCCGTACCCATCCCTAAACAAGTCAAACCATCAGAGGAAGCACAAGATTTGCACGAATCTCCAAGCAGAAGAAGGTGAGAATATGTTCAGCAAGAAGAACCAGAACAAGAGAATAGTGAAGCAGGTGAGAGCAGATGGATTATGCGACGCATGGGCATGGCGTAAATACGGGCAGAAACCGATCAAGGGATCGCCATATCCCAGAAGCTATTACAGATGCAGCAGCTCCAAAGGATGCTTGGCGAGGAAACAAGTGGAAAGGAGCCATTTGGATCCTGAAGTTTTCATAGTGACTTATACTGCAGAACACAGTGATCATCACCCACCTCGCTCCTCTCGCAAAACTAGGCACTCCAATATTCCACCTGAAACTACACAACACACGTCTTCTCCTTTGGAAGACTCCATTGAAGAAGATGAGCCAATTGTGTCCAGTGGGTCAAGCCAGCGCTTGAACAAAGATGCTGACATTGGTCAGATTGTCACAGATCAGAATATATTAACCAATGGTGATTGGTTTCCAAGTATAGACGAACTTGACGGGCTTAGCCAAGAATTTGCATTAGATGGTTACCTTTACGGCCAATCCTGA 720 0.4486 MILSAVLFQNSQIPRWCLMNWESFTSLSILFYSLFQHKQSQRLPYPSLNKSNHQRKHKICTNLQAEEGENMFSKKNQNKRIVKQVRADGLCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPEVFIVTYTAEHSDHHPPRSSRKTRHSNIPPETTQHTSSPLEDSIEEDEPIVSSGSSQRLNKDADIGQIVTDQNILTNGDWFPSIDELDGLSQEFALDGYLYGQS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5337g00086 239 MobiDBLite consensus disorder prediction 184 198 - -
Pral5337g00086 239 SUPERFAMILY WRKY DNA-binding domain 85 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5337g00086 239 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 48 183 IPR044810 GO:0003700
Pral5337g00086 239 MobiDBLite consensus disorder prediction 143 198 - -
Pral5337g00086 239 Gene3D WRKY domain 74 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5337g00086 239 FunFam WRKY transcription factor 22 74 144 - -
Pral5337g00086 239 Pfam WRKY DNA -binding domain 92 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5337g00086 239 ProSiteProfiles WRKY domain profile. 85 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5337g00086 239 SMART WRKY_cls 90 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5337g00086 Pral-Chr5337 516291 517333 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5337g00086 74 204 WRKY Transcription Factor Family AT5G52830 51.724 1.24e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5337g00086 WRKY 7.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5337g00086 K13426 - gmx:102667104 155.992