Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5337g00085 ATGGACTGGGATTTGCAAGCTGTTGTGAGAGGGCACACCGGTGAAGCCCCAGAAACAACGACGATCATAGATATCACACATCCTAATTTTCCTCATTTCTGTTCTGAATTACAAGTTCACGATGATCCTTTCCGCAGTACTTTTCCAGAATTCTCAGATACCACGATGGTGCTTGATGAATTGGGAGAGCTTTACAAGCCTTTCTATCCTGTTTTACAGCCTCTTTCAACACAAACAATCACAACGACTTCCGTACCCATCCCTAAACAAGTCAAACCATCAGAGGAAGCACAAGATTTGCACGAATCTCCAAGCAGAAGAAGCAAGAAGAACCAGAACAAGAGAATAGTGAAGCAGGTGAGAGCAGATGGATTATGCGACGCATGGGCATGGCGTAAATACGGGCAGAAACCGATCAAGGGATCGCCATATCCCAGAAGCTATTACAGATGCAGCAGCTCCAAAGGATGCTTGGCGAGGAAACAAGTGGAAAGGAGCCATTTGGATCCTGAAGTTTTCATAGTGACTTATACTGCAGAACACAGTGATCATCACCCACCTCGCTCCTCTCGCAAAACTAGGCACTCCAATATTCCACCTGAAACTACACAACACACGTCTTCTCCTTTGGAAGACTCCATTGAAGAAGATGAGCCAATTGTGTCCAGTGGGTCAAGCCAGCGCTTGAACAAAGATGCTGACATTGGTCAGATTGTCACAGATCAGAATATATTAACCAATGGTGATTGGTTTCCAAGTATAGACGAACTTGACGGGCTTAGCCAAGAATTTGCATTAGATGGTTACCTTTACGGCCAATCCTGA 825 0.4497 MDWDLQAVVRGHTGEAPETTTIIDITHPNFPHFCSELQVHDDPFRSTFPEFSDTTMVLDELGELYKPFYPVLQPLSTQTITTTSVPIPKQVKPSEEAQDLHESPSRRSKKNQNKRIVKQVRADGLCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPEVFIVTYTAEHSDHHPPRSSRKTRHSNIPPETTQHTSSPLEDSIEEDEPIVSSGSSQRLNKDADIGQIVTDQNILTNGDWFPSIDELDGLSQEFALDGYLYGQS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5337g00085 274 SUPERFAMILY WRKY DNA-binding domain 120 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5337g00085 274 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 218 IPR044810 GO:0003700
Pral5337g00085 274 Pfam WRKY DNA -binding domain 127 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5337g00085 274 MobiDBLite consensus disorder prediction 84 116 - -
Pral5337g00085 274 MobiDBLite consensus disorder prediction 94 109 - -
Pral5337g00085 274 Gene3D WRKY domain 109 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5337g00085 274 SMART WRKY_cls 125 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5337g00085 274 FunFam WRKY transcription factor 22 109 179 - -
Pral5337g00085 274 MobiDBLite consensus disorder prediction 219 233 - -
Pral5337g00085 274 MobiDBLite consensus disorder prediction 178 233 - -
Pral5337g00085 274 ProSiteProfiles WRKY domain profile. 120 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5337g00085 Pral-Chr5337 516291 517472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5337g00085 2 271 WRKY Transcription Factor Family AT4G23550 40.764 3.93e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5337g00085 WRKY 9.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5337g00085 K13426 - gmx:102663255 241.891