Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5337g00053 ATGGCTAACGCAGGTAATTGTTCGTCGTCGTCCATGAAAGCGACGTCGAATGGAGTGTTCCAAGGAGATAATCCACTTGATTATGCTCTGCCTCTTGCCATCTTACAAATCTGCCTTGTGGTGATTGTCACGCGTGTTCTTGCTTTTCTTATCAAACCCTTGAGGCAGCCTCGTGTCATTGCCGAGATTGTTGGTGGAATACTGCTAGGTCCATCGGTGCTGGGGCGCAACAAAACCTACCTGAATAAAATATTCCCTGCCAGAAGTCACACAGTGTTGGACACTTTGGCCAATCTTGGTCTCCTTTTCTTTTTGTTCCTTGTGGGCCTTGAGCTGGACCCGAGGTCCCTTCGCCGGACCGGAAAGAAAGCTCTTCTCATCGCCCTTGCCGGAATCAGTCTCCCTTTCGTAATAGGAATCGGAACATCCTTTGTGCTACGTGCAACTATTTCAGAAGGTGTCAGCAAAGCTCCTTTCCTCGTATTCATGGGAGTGGCTCTTTCCATCACTGCATTTCCGGTGTTGGCTCGTATTTTGGCTGAGCTCAAGCTCTTAACCACCGATCTCGGTCGGATGGCCATGTCGGCAGCCGCTGTTAATGATGTCGCCGCGTGGATTCTTCTCGCTCTCGCAGTCGCTCTTTCTGGTTCTGGACAGTCTCCTCTGGTTACACTCTGGGTTTTATTGTGTGGTTGTGGTTTTATCTTAGGTTGCATACTTATTCTTCCGCGAATATTTGGTTGGATGGCTCGGCGTTGTCCTGAAGGTGAACCGGTCGGCGAATTGTACATCTGTGCGACATTAGTTGTAGTACTGGCGGCTGGTTTTATTACTGATCTTATTGGAATCCACGCCCTATTTGGTGCATTTGTGGTTGGAGTTCTTGTGCCAAAAGAAGGACCCTTTTCTTCAGCTCTTGTTGAGAAAGTGGAGGATCTAGTATCTGGTCTCTTACTTCCATTGTACTTTGTTTCCAGTGGACTAAAGACAAATGTGGCTACTATTGAAGGCGCTCAGTCATGGGGTCTTCTGGTTTTAGTCGTATTTACGGCTTGTTTTGGAAAGATGGTTGGCACCATACTTGTCTCCCTCCTCTGTAAGGTACCTGTACGGGAGGCTGTCGCTCTTGGATTCCTCATGAATACCAAGGGATTGGTGGAGCTCATTGTCCTTAATATTGGTAGAGACAGACAGGTGTTGAATGACCAAACATTTGCTATCATGGTGCTGATGGCTGTCATCACAACGTTCATCACAACGCCTGCTGTTATGTCAGTGTATAACCCGGCCAAAAGAAGGGTGAAAACTGACTATAAATATAGAACTGTTGCGAGGGAAGAGCCGAGCACTGAGCTTCGGCTTTTGATATGTTTCCACAGTGGAAGGAACATCCCATCAATGCTGAATCTGGTTGAAGCTTCCCGAGGCACTGGAAAGAGAGAAGGGCTTTGCTTGTATGCATTGCACCTCATGGAATTGACGGAGAGGCCATCAGCTATCCTAATGGTTCACAAGGCCAGAAAGAATGGGCTTCCTTTTTGGAACAAAGCTCGACGTTCTGAAACCAACCAAATCGTAGTTGCTTTTGAGGCTTTCGAGCAGCTAAGCCGAGTATCTGTTCGTCCCATGACGGCTATCTCTGCCATGTCAACCATTCATGAGGACATATGCGAATCTGCAGAGAGTAAAAGAGCAGCAATGATAATCATCCCATTTCATAAGCACCAAAGGATAGATGGAACCTTGGAAACCACTCGATCAGAATTTAGAGCAGTGAATCGGAGGGTTCTGGCACACGCACCATGCTCAGTAGGGATCTTGGTAGACCGTGGACTTGGTGGAAACACTCATGTACCAGCAAGTAATGTTTCTTCTGCAATGACTGTTCTATTCTTCGGGGGTCCTGATGATGAAGAAGCCTTAGCTTATGGTCTGCGAATGGCGGAACATCCTGGTATTAGTTTAACCGTTGTCTGTTTCCTAGCGGGAAGCTCAGAACATGTAGCGGCAGGAGGAGAGATTGTGAGTGTAGATATGAACGAGGAGACATCATCAACTAAGAAAGAAGGATTAGGAGACGAGAAATTCCTCACGAAAGTGAAACAAAATGTGTCAGATAACAATTCAGTGAAGTTTGAAGAGAGGATGGTGAAAACTTGTGAAGAAGTTGTGGAGGTGGCTAGAGAGTATAGCAAATGCAATTTGGTTTTAGTAGGGAGGAAGCCAGAAGGTGAAGTGGCCATAGCTTTGAAGAATAACAATGGAAGAGGCGAGTGCCCAGAACTGGGGCCAATATGTAATTTACTTACCTCTTCAGAGTTCTCAACCACAGCATCAGTATTGGTAGTTCAACAGTACCAAGGCCAGAAAGCTGTGAATCGTGCACACTCCTCGTTTGCCTCGAGTAGAGTTGCAGCTATATTTGCGAATGAAGATGAGGACAAGAATTCTAAGTAA 2457 0.4648 MANAGNCSSSSMKATSNGVFQGDNPLDYALPLAILQICLVVIVTRVLAFLIKPLRQPRVIAEIVGGILLGPSVLGRNKTYLNKIFPARSHTVLDTLANLGLLFFLFLVGLELDPRSLRRTGKKALLIALAGISLPFVIGIGTSFVLRATISEGVSKAPFLVFMGVALSITAFPVLARILAELKLLTTDLGRMAMSAAAVNDVAAWILLALAVALSGSGQSPLVTLWVLLCGCGFILGCILILPRIFGWMARRCPEGEPVGELYICATLVVVLAAGFITDLIGIHALFGAFVVGVLVPKEGPFSSALVEKVEDLVSGLLLPLYFVSSGLKTNVATIEGAQSWGLLVLVVFTACFGKMVGTILVSLLCKVPVREAVALGFLMNTKGLVELIVLNIGRDRQVLNDQTFAIMVLMAVITTFITTPAVMSVYNPAKRRVKTDYKYRTVAREEPSTELRLLICFHSGRNIPSMLNLVEASRGTGKREGLCLYALHLMELTERPSAILMVHKARKNGLPFWNKARRSETNQIVVAFEAFEQLSRVSVRPMTAISAMSTIHEDICESAESKRAAMIIIPFHKHQRIDGTLETTRSEFRAVNRRVLAHAPCSVGILVDRGLGGNTHVPASNVSSAMTVLFFGGPDDEEALAYGLRMAEHPGISLTVVCFLAGSSEHVAAGGEIVSVDMNEETSSTKKEGLGDEKFLTKVKQNVSDNNSVKFEERMVKTCEEVVEVAREYSKCNLVLVGRKPEGEVAIALKNNNGRGECPELGPICNLLTSSEFSTTASVLVVQQYQGQKAVNRAHSSFASSRVAAIFANEDEDKNSK 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5337g00053 818 Gene3D - 32 436 IPR038770 -
Pral5337g00053 818 PANTHER CATION/H + ANTIPORTER 8 788 - -
Pral5337g00053 818 Pfam Sodium/hydrogen exchanger family 38 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pral5337g00053 818 Gene3D - 471 751 - -
Pral5337g00053 818 FunFam Cation/H(+) antiporter 15 32 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5337g00053 Pral-Chr5337 319025 324031 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5337g00053 3 788 Antiporter Super Family AT5G41610 67.509 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5337g00053 K26731 - qsa:O6P43_034301 1160.98