Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5337g00044 ATGGAGAAGTTGAAGAGCGTTGAAATTCTTTGTTTAGCTTCAATGGCGACTTTGGTCTGTCGAACAGACCAGCGAAGTAAACCAACCTATAGCAGAAACATCTCGTTCCTGCTGGAAGTAGTGCATTTTCGCCGAATGGCATTTCTACGCATTTTCTATTCCATTTGCCTACTGGATCTGGTTCTCCGGCAAGGAAATGCAGAGCCTCTTGAAGATAAGCGAGCTTTGCTTGATTTTGTGGACCAGTTCTCTCACTCTCGCCCTCTAAATTGGAACGAGAACACTTCTGTGTGTACTAATTGGACTGGAGTCACTTGTAACGAAGACAAGTCCCGAGTAATAGCCATTCGACTGCCGGGCATTGGATTTCATGGAGCAATTCCACCCAACACAATTAGCCGCCTCTCAGCGCTGCAAATCGTGAGCCTCAGATCCAATTTTCTCAGTGGGAGTTTCCCTTCTGATTTTTCTGAGTTAAAAAACTTGTCTGTACTGTACCTTCAATTTAATAACCTGTCGGGTTCTTTACCGGATTTCTCTGTCTGGAAGAATCTTACCATTATCAATTTGTCCAATAATCGTTTCAACGGCAGCATTCCTTTCTCAGTTTCTAATCTGACTGAGCTTGCTGGTTTGAATCTCGCAAACAACTTGCTTTCTGGTGAAATTCCTGATATCCAGTTGCCTAGATTGCAACAGCTAAATTTGTCCAACAACAAGTTGAACGGTAGTGTGCCTAACTCTCTCCAGAGGTTTCCTATGTCAGCATTCCTCGGTAATAACATATCTTTTGGAAATTATCGTCACCTTTCTCCTCTACTTCCTCCTTCTTCCAAACCATCTTCAAAATCCAAGAAACACGGAGCTCTCCGGGAAGCAGCACTTCTGGGAATTTCGATTGCTGTTGGTGTGCTTGCTCTTTTAGCATTTGGTTTTCTGATGTTTGTATGCTTCTCAAGAAGGAGGGACGAAGATGGGTTCTCTGGGAAGTTGCAGAAGGGAGGAATGTCTCCGGAGAAAGAAGTTTCGAGAAATCAAGATGCGAATAATAAACTTGTTTTCTTTGAGGGATGTAACTATGCCTTTGACTTGGAGGATTTATTAAGGGCTTCTGCTGAGGTACTGGGCAAAGGAACGTTTGGCACTGCATACAAGGCCATACTAGAGGATGCTTCCACAGTCGTCGTAAAAAGGCTGAAGGATGTAGCTGTTGGAAAGAAAGACTTTGAGCAACACATGGAGATTGTGGGAAGTCTTAAACATGATAATGTAGTTGAGCTGAAAGCATATTACTATTCCAAGGATGAGAAATTGATGGTATATGATTATTACAGCCAGGGGAGCCTATCTTCTTTACTGCATGGTAAAAGAGGAGAGGATAGGGTGGCTTTAGACTGGGATAGTCGGCTTAAAATAGCAATAGGTGCTGCAAGAGGGATTGCTCGGATCCACGCAGAGAATGGTGGAAAGATGGTGCATGGAAACATCAAATCTTCAAATATTTTTGTCAACTCTAAGCAGTATGGTTGTGTGTCTGATCTTGGGTTGGCCATGATAATGAGCTCACTGGCCCTCCCCATCTCACGTGCTTCTGGCTATCGAGCGCCCGAAGTTACGGACACCAGAAAAGCAGCACAGCCTTCAGATATTTACAGTTTTGGAGTGGTGTTACTGGAGCTTCTGACTGGGAAATCCCCCATACTTACCACAGGCGGGGATGAGATTGTCCACTTGGTGAGGTGGGTCCATTCAGTAGTGCGAGAGGAGTGGACAGCTGAAGTGTTTGACCTGGAACTGATGAGATATCCAAATATAGAAGAAGAGATGGTGGAGATGTTGCAGATAGCCATGGCATGCGTGGCAAGGATGCCAGATCAGAGACCGAAGATTTCAGACGTTGTAAAGATGATAGAAAATGTGAGGCAACTTGATATGGAGAATCGTCCACGACCTGATGAGAGCCAAGCTGAAAGTGCAACACCACCGTCAGTGTTAGGTACCCAGCAGTCATCACAAATTCTTTGA 2025 0.4444 MEKLKSVEILCLASMATLVCRTDQRSKPTYSRNISFLLEVVHFRRMAFLRIFYSICLLDLVLRQGNAEPLEDKRALLDFVDQFSHSRPLNWNENTSVCTNWTGVTCNEDKSRVIAIRLPGIGFHGAIPPNTISRLSALQIVSLRSNFLSGSFPSDFSELKNLSVLYLQFNNLSGSLPDFSVWKNLTIINLSNNRFNGSIPFSVSNLTELAGLNLANNLLSGEIPDIQLPRLQQLNLSNNKLNGSVPNSLQRFPMSAFLGNNISFGNYRHLSPLLPPSSKPSSKSKKHGALREAALLGISIAVGVLALLAFGFLMFVCFSRRRDEDGFSGKLQKGGMSPEKEVSRNQDANNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDASTVVVKRLKDVAVGKKDFEQHMEIVGSLKHDNVVELKAYYYSKDEKLMVYDYYSQGSLSSLLHGKRGEDRVALDWDSRLKIAIGAARGIARIHAENGGKMVHGNIKSSNIFVNSKQYGCVSDLGLAMIMSSLALPISRASGYRAPEVTDTRKAAQPSDIYSFGVVLLELLTGKSPILTTGGDEIVHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMACVARMPDQRPKISDVVKMIENVRQLDMENRPRPDESQAESATPPSVLGTQQSSQIL 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5337g00044 674 FunFam Probable inactive receptor kinase RLK902 70 227 - -
Pral5337g00044 674 Pfam Protein kinase domain 372 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5337g00044 674 Gene3D Transferase(Phosphotransferase) domain 1 444 659 - -
Pral5337g00044 674 Gene3D Ribonuclease Inhibitor 181 270 IPR032675 -
Pral5337g00044 674 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 444 651 - -
Pral5337g00044 674 Gene3D Ribonuclease Inhibitor 71 180 IPR032675 -
Pral5337g00044 674 PANTHER OS05G0588300 PROTEIN 52 650 - -
Pral5337g00044 674 MobiDBLite consensus disorder prediction 654 674 - -
Pral5337g00044 674 SUPERFAMILY Protein kinase-like (PK-like) 373 663 IPR011009 -
Pral5337g00044 674 ProSiteProfiles Protein kinase domain profile. 369 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5337g00044 674 MobiDBLite consensus disorder prediction 644 674 - -
Pral5337g00044 674 SUPERFAMILY L domain-like 83 252 - -
Pral5337g00044 674 Pfam Leucine rich repeat N-terminal domain 71 107 IPR013210 -
Pral5337g00044 674 ProSitePatterns Protein kinases ATP-binding region signature. 375 406 IPR017441 GO:0005524
Pral5337g00044 674 Gene3D Phosphorylase Kinase; domain 1 336 443 - -
Pral5337g00044 674 FunFam pollen receptor-like kinase 1 338 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5337g00044 Pral-Chr5337 248449 252368 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5337g00044 61 664 Receptor kinase-like Gene Family AT4G23740 64.172 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral5337g00044 Pkinase 1.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5337g00044 - - gmx:100804799 930.243