Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5337g00027 ATGGAGAATGACATGAGGTGGGAGCCGAGCACACTTACAAATGAGCTACTTCAAGGAATGGAGGCAGCGAGGAAGCTGATGGCAGATTTTAGGACGCAATCCTCGGTAGAGAGCAGGGATTTGCTGGTACAGAGGATATTATCATCTTATGAAAAGGCTCTGCTAATTCTGAAATGGAATGCGTCAAATACCAAACCCCTTCCCATGGGGACAGTAGCTGGTTTGCTGCCAGAATCTCCGATATCAGTCAACGCAAGTCCTTTCAGAGATGACGTTGATGGGGATCATCCTGAGCTTAAACCAGATTGCAAGAAAAGAAAGACGATGCCCACATGGATGGAACAAGTAAGATCTAGCTCTGAGACTGCCCTGGAAGGACCCCAAGATGATGGCTTCAGCTGGAGAAAATATGGACAGAAAGACATCCTGGGTGCCAAATATCCTAGAAGTTACTATAGGTGCACCTTCCGCAAGACTCAGGACTGCTGGGCCACGAAGCAGATACAAAGATCAGATGAAGACCCTACTGTATTTGACATCACTTACCGAGGAAGGCATACTTGTTCCTTGGGAAATAATGCTGTTCGGCCACCCAAGTCACCAGACAAACAGGAGAAAATACATGATTATCAAAGTGACGTCCGCCATCACGAGCCATTACAAGAGAGCCTAGTGAAATTCAGAAGTAACTTGAGTGTCAATACAGATAACCTAAAAAACGAGGATATGGCAAATCCTTTTACTTTCCTTTCAACTTCCTCTGGATACATGACACCGGAAAGCCACAGTTCACGTCCCTTGGCACTAGAGAATGATCCCTTCTGGGGGAACCTTTCACAAACAGAATTGCTATCTCCAAACACGCCAGAATCAAACTATTTACCATCTCTGTCTTTCAAGATTGATGAGTTCCATTGCATTAGAAACCAGCCATGCTCAGAATCTGACATTACTGAGATCATTTCAGCCAACACATCAGCCACCAATTCTCCAATTCTCGATTTTAATTTCCCTATTGATCCGGTGGAAATTGATCCAAATTTCCCTTTTGACACCCCGGGACTTTTCCCATAA 1074 0.4469 MENDMRWEPSTLTNELLQGMEAARKLMADFRTQSSVESRDLLVQRILSSYEKALLILKWNASNTKPLPMGTVAGLLPESPISVNASPFRDDVDGDHPELKPDCKKRKTMPTWMEQVRSSSETALEGPQDDGFSWRKYGQKDILGAKYPRSYYRCTFRKTQDCWATKQIQRSDEDPTVFDITYRGRHTCSLGNNAVRPPKSPDKQEKIHDYQSDVRHHEPLQESLVKFRSNLSVNTDNLKNEDMANPFTFLSTSSGYMTPESHSSRPLALENDPFWGNLSQTELLSPNTPESNYLPSLSFKIDEFHCIRNQPCSESDITEIISANTSATNSPILDFNFPIDPVEIDPNFPFDTPGLFP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5337g00027 357 ProSiteProfiles WRKY domain profile. 123 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5337g00027 357 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5337g00027 357 FunFam WRKY transcription factor 53 114 191 - -
Pral5337g00027 357 SUPERFAMILY WRKY DNA-binding domain 127 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5337g00027 357 Pfam WRKY DNA -binding domain 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5337g00027 357 Gene3D WRKY domain 113 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5337g00027 357 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 266 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5337g00027 Pral-Chr5337 152422 154461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5337g00027 5 249 WRKY Transcription Factor Family AT4G23810 45.588 1.01e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5337g00027 WRKY 6.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5337g00027 - - gmx:100815760 476.863