Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5337g00026 ATGGGTGATCATCCCCCGAAACAGTCAACCTCTGAAGAAGCGATCAGTATCGAGTGGGAGTCCATAAAGATGAGTGAGCAAGAGGAGGATCTCATCCACAGGATGTACAGGCTCGTCGGCAACAGGTGGGATTTGATAGCGGGACGCATTCCTGGTCGGAAAGCAGAAGAGATAGAGAGGTTCTGGATTATGAAGCACGGTGAAGCTTTCTCTGCTACAAGTCATTCAACAGCTCTCTACTAA 243 0.4897 MGDHPPKQSTSEEAISIEWESIKMSEQEEDLIHRMYRLVGNRWDLIAGRIPGRKAEEIERFWIMKHGEAFSATSHSTALY 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5337g00026 80 Pfam Myb-like DNA-binding domain 23 63 IPR001005 -
Pral5337g00026 80 SMART sant 20 68 IPR001005 -
Pral5337g00026 80 Gene3D - 24 78 - -
Pral5337g00026 80 SUPERFAMILY Homeodomain-like 25 63 IPR009057 -
Pral5337g00026 80 CDD SANT 23 62 IPR001005 -
Pral5337g00026 80 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 23 65 - -
Pral5337g00026 80 FunFam MYB-like transcription factor 23 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5337g00026 Pral-Chr5337 147440 150828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5337g00026 24 62 MYB Transcription Factor Family AT5G52600 61.538 5.18e-13 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral5337g00026 Myb_DNA-binding 6.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5337g00026 K09422 - mus:103974532 109.383