Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5337g00026 | ATGGGTGATCATCCCCCGAAACAGTCAACCTCTGAAGAAGCGATCAGTATCGAGTGGGAGTCCATAAAGATGAGTGAGCAAGAGGAGGATCTCATCCACAGGATGTACAGGCTCGTCGGCAACAGGTGGGATTTGATAGCGGGACGCATTCCTGGTCGGAAAGCAGAAGAGATAGAGAGGTTCTGGATTATGAAGCACGGTGAAGCTTTCTCTGCTACAAGTCATTCAACAGCTCTCTACTAA | 243 | 0.4897 | MGDHPPKQSTSEEAISIEWESIKMSEQEEDLIHRMYRLVGNRWDLIAGRIPGRKAEEIERFWIMKHGEAFSATSHSTALY | 80 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5337g00026 | 80 | Pfam | Myb-like DNA-binding domain | 23 | 63 | IPR001005 | - | |
Pral5337g00026 | 80 | SMART | sant | 20 | 68 | IPR001005 | - | |
Pral5337g00026 | 80 | Gene3D | - | 24 | 78 | - | - | |
Pral5337g00026 | 80 | SUPERFAMILY | Homeodomain-like | 25 | 63 | IPR009057 | - | |
Pral5337g00026 | 80 | CDD | SANT | 23 | 62 | IPR001005 | - | |
Pral5337g00026 | 80 | PANTHER | TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 | 23 | 65 | - | - | |
Pral5337g00026 | 80 | FunFam | MYB-like transcription factor | 23 | 65 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5337g00026 | Pral-Chr5337 | 147440 | 150828 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5337g00026 | 24 | 62 | MYB Transcription Factor Family | AT5G52600 | 61.538 | 5.18e-13 | 59.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Pral5337g00026 | Myb_DNA-binding | 6.2e-07 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5337g00026 | K09422 | - | mus:103974532 | 109.383 |