Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5337g00003 ATGTTACAGGTTAGTCCTGCACAAAAATTCCGAGAAAATGCTCAAAATGGTCAAAGTCCCGATCGTTGGCAGAAGTCCAATCAGACATACCCCATATATGTAGTCCCCCGTCTTGATTCAACACAGGCATGTTCTCTCATGGCTCATTCGTCAGGGTTCATCTCCGTCTTCCTCTTCCTCTTCCTTATTTGTCCCACAACAAGAAGTATTCATATGTGCGAGACATATTGCGACCCGAACGAATTTCCCGTTCAGTTCCCTTTCCAGTTGGTCAGAGACGAATTAGCGAATGGAAGCAACACTCGTTGTGGATACCCTGGTTTTGAACTTTCCTGCAACAAAAGCAGAACGATGCTTCATCTCCCACACGCTGGAGACTTCCTGGTGGATTTAATCTCCTATGAAGATCAAAAGCTTTGGATCAGAGACCCCGATAATTGCCTCCCCAGACGATTCATGAACAACGAATTCAACCTCACAGATTCCACCTTCCAACTCAGCGATGATTATGGCCTTATGAACTTCACCTTCTTCAACTGCTCCTCCAACGTCACCCAGCAGTACCAACGTCGACCCATCCCTTGCTTAAGCTCTGACCTCAACCAGAACCATTCGGTGTTCGCTGTTTTGTCAGATTTTCCCTTTTCTACGCCATGGATCGAGGGGTGTAAGCCCATTTCCTCTGCTTCAGTTCCCTCTTCTATCCCCAATGGAATATTCTGGGGGGACCTGAATGCTGATATAGGCTTGCAATGGAACACTCCAAGCTGTGGAGACTGTGTGGCGAAGAATGGACGGTGTGAGTTCTTGAAGAATACAGGTCTTGAAGTCGCTTGCTATTTAACACACCAAGGTGGTCTTTCAAAGTTTGCCAAGTACGGATTAGGCTTTGGAGTGGGAATTCCTGGGTTGCTGAGTGTGATCGGAATCGTGTACATGTGTAAAGGGAGGCGAAGAAGGAACGAAGATGGAAGGCAAAGCAGAAATATTGAACTGAATAATGTCGCAGGGTGGTCGTCTATAGTAGTTATGGGGCTTGATGGAGAAAGCATAGACAAGTATCCTATGACTCGGATTGGGGATAGTGGCGATTGCCCGACCCGACAACAACGTTTGCTCTATATGCCTCAGTGA 1134 0.4683 MLQVSPAQKFRENAQNGQSPDRWQKSNQTYPIYVVPRLDSTQACSLMAHSSGFISVFLFLFLICPTTRSIHMCETYCDPNEFPVQFPFQLVRDELANGSNTRCGYPGFELSCNKSRTMLHLPHAGDFLVDLISYEDQKLWIRDPDNCLPRRFMNNEFNLTDSTFQLSDDYGLMNFTFFNCSSNVTQQYQRRPIPCLSSDLNQNHSVFAVLSDFPFSTPWIEGCKPISSASVPSSIPNGIFWGDLNADIGLQWNTPSCGDCVAKNGRCEFLKNTGLEVACYLTHQGGLSKFAKYGLGFGVGIPGLLSVIGIVYMCKGRRRRNEDGRQSRNIELNNVAGWSSIVVMGLDGESIDKYPMTRIGDSGDCPTRQQRLLYMPQ 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5337g00003 377 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 53 368 IPR046948 -
Pral5337g00003 377 MobiDBLite consensus disorder prediction 1 24 - -
Pral5337g00003 377 Pfam Wall-associated receptor kinase galacturonan-binding 73 143 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5337g00003 Pral-Chr5337 17803 19032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5337g00003 77 366 C3H Transcription Factor Family AT2G46495 27.609 8.46e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5337g00003 - - pcin:129323052 366.696