Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5336g00016 ATGAACCTTTCTACGCCAATACATAGGGTTTTTGTCAGACTCCACTATTGGATATGGTTCTGTTTTGTATGCATTGACAATTGGGCTTCCATCACAAATCTCTGCCCACTTTGCCAGAATGAGTTTCAGCTAATCACATGTGTTCCAGTATATGATACCATTGGAAGCAATAAAATCGAAGATGACGTGTTATCCAGAGATGATGACTGGTCCATTGAAGGGAGGAATAACACTCTGTCATTCCCTTCATACTATATTGATGAAAATGCAGTTGTTTGCTTGGATGGTGATGGCTGCAAAATTCGAAGTGGATCAGCAACCATTGAAGGTGATTTGAGCCTTGATACATCAATTGCTTGTGATTCATGTGATATGTGGTATCATGCTTTTTGTGTGGGATTTGATCCTGAAGGTACATCTGACGTTACATGGTTATGCCCAAGATGTGTGCCAGATAAAGTTACTGAAAACATGGATGCAAGTTCATTAGAGAAGACAACCATGGAAATCAACCCAGAAAATGGTGACAAGGAATGTCAGGCTGAGGAATCATTTTCAGGAAAAGTTTCTGTATCTGTTGCTGATGCTGGAGAGACAGCTGTTGTTGTCTCTTTGGTTGAAGGAACCCAATGGAGTCCTGTATCAAGAGAGGAGGGTTTATCACCCCTTGAAGCTTGCCAGAATCCAATGACTGAATCATGTTCTTCCATATCTGACGTCAATAATCACCAAAGTAATACAGAGAAGACTGTTAATTCACCAGGGGTGCAACAGGAGCTGGAGCTGTCCTTATCACACAACGTGGGCTGTAGCTTGTCCTCTAACACCTTAGGGCCTGATGATTTGAAGAAGGGCACTTCTGGAGAAAGGAGTGATCCAAGTAGCTTAAGTGGAACCAAAATATTTAATGAATCCCATGACAGAGCTAGTACATCTAGAAATGGATCTGATATGGGTCTTCATCTCGGTTTGTCAGTTGGCTCCTTTTTATGTGTTGATGACGCAGACATGAATGCAACAAGAGATCAAGAAACTGATCTCCAGCAGTCAAGTTTAGAAGATTTTATTTTGAAAGGAGATGAAATGGAACCAAATGCTCTTAATGACAATGCCAGAGTAAATGGGGAAAAGAGAAAGCATGCTGATTACAGTAATGATGAGGTTCGCATAGAAGTTGATAGAGATGCCGAACTCAAACCTGAAGTTGAAGTGTCACAAAAGAAACTCAAAACTGATGGCAGTGTACTGACTAATCATGAGAACGGAGCAGGTGCTCATCTTTCAGATGATACTAAAACAAACCCTTCTACTACACCCATTTCCAGTCACGATGATGTAAAGCATCATTCAACAAAGGAGAATGCTGCATCAGATATAATGAGTATAGTTAAAGGCACGAAGTGGAAGCCTTCAAAGGAAATTTCTGGATCCAAATCCTGTGATAAGTTATCCAAGAACAACGAAAATATGGCAGGTTTGAGGGTAAAAAAGATCATGAAGAGAGCTTCAGATCATGGGGAGTTATCCTTAGTTCAAAACCTAAGGGCAGAAATTAGAGAAGCTGTCCGTAACAAATCCTCTAAAAGTTTTGAAGAAAATCTTTTTGATACAAAGCTTCTTGCAGCATTCAGGGCTGCTGTAGCAGGGCCTAAAACTGAACCTCTAAATAAGCTGCCCCCTATGGCTTTGAAGGCAAAGAAGTCAATGTTGCAGAAAGGAAAAGTCCGTGAACATCTAACTAGGAAAATTTTTGGGAATTCAAATGGAAGAAGAAAGCGTGCATGGGACAGGGACTGTGAAATTGAGTTTTGGAAATATCGTTGCTCTCGAGCAGCGAAGCCTGAAAAGATTGAAACTTTGAAGTCAGTTCTGGATCTTCTAAGAACGAGTCCAGAGAGTGCAGAAGCGAAGGAGGGTCCTGAAGGTCAGGCCAAGAATTCTATTCTTTCCAGGTTGTATTTAGCAGATACATCTGTTTTCCCACGAAAAGATGATGTCAAGCCACTTTCTGTCCTTGAAACTGCTGCTAACTCTGAGCAGAATGAAAAACATAACCTTTCAGGAAAAGCATCAAATCAGTCTCTTGGTAATAGTCCTATTAAAGCAAAAGAGATAAATAATGTCTTACCAAAAGCCAGAGATTGCTTATCTGAAAACAAAGTAAATAACAAGATTGTACATAGCTCAGTTCGTGGTAATTCAGCTTCTGGTAAAGTACCTTCAAGCAGACATTCAGAAGGGGCAGCAGGTTCTTGCCCTGGTGACTCCAGAGTTGAGTCAAAGGAGTCATGCGTTAAATCGGATTGTATAAAGAGTGACAAAAGAAAATGGGCCTTGGAGGTTCTTGCAAGAAAAAGTGCTGCTGCTGGCAAGAAAATGACAAATGACAATCAGGAAGATAATGCACTTCTTGAAGGAAAATATCCTTTACTGGCCCAATTGCCAGCTGATATGAGACCAGCATTGGCGCCCAGTCGCCACAATAAAATTCCTATATCAGTAAGGCAGACACAACTTTACCGCCTGACTGAACACTTCTTGAGGAATGCAAATCTGTCAGTCATTCGCAGAACTGCAGATACAGAATTGGCCGTTGCAGATGCAATTAATATTGAAAAAGAGGTGGCTGACAGATCAAACAGCAAGCTAGTGTATCTGAATCTCTGTTCACAGGAACTCTTGCACCGCTCAAGTAATAGAAAATCCAATGGAGCAACAGATATAATTCCACAGGTCTCATCATCAGTCCCTGCTGATGGAGCAGAACAACATACTGATGATGATCCTTCAACTGACTCTGCAGTCCAAATAGCCCTTAAAAATGCTGGTCTTTCGTCCGATTCTCCTCCCTGTAGTCCGAGTGAGAAAAGAGAAATATCCAATAAACAAGTTGATGTTTCAGGGCCTGATAATATTCTCGAACTGGATTTTCAACCAGAGATGGATATTTATGGGGACTTTGATTATGATTTGGAAGATGAAGATTACATTGGTGCAGGTGTTGCTAGAGGCTTAAATTCACAAGAAGAAGAAAGCGAGTCAAAAATGAAACTCATTTTCTCTACCACGAACTTGAGGAGTTCAGATACTGTTTTGGATTGTACGGATTCTGAGAGCTTGGAAAACAATGACGTTCCACGAGACCCCTCTTGCTCATCAAATCATGATGATGCGGCTAACGCGGACCCCGCAATTGATGCAGAGACTGACAATCATCCTCCTGCTCCTTCTGAGGCCCTTCTCAGTGAGCCATGTGATGCAGAATGCGAAGAATTATATGGTCCAGAGAAAGAACCACTTACAAAAAAATTTCCGAATGAGGAATTTATAACATTACATGGAGAGGGCAAATCAGGAACTTCAACTGAAGGCAATGACTGTCATAATAAAGAACAAGCGTCAGACCAAGCAGTAAATGCGTCTGAATCTGGGAATGACGAACTTGCAAAGAACACGCCGGTCACTGCTATTGCTAACAATTCATCTAATGCATCTGATATTAGTGAAAATTTACAGAGGGAGGGAGAGAAATCTGACACCGCCCCTGAGCAGTCTGACCCTGCAAATAATGTAGTCAGAAAGGTTGAAGCTTATGTCAAGGAGCATATCAGACCATTGTGCAAGAGTGGTGTGATCACAGCTGAACAGTACAGGTGGGCCGTCGCAAAAACAACGGAAAAGGTTGTGAAGTACCATTGTAAAGCCAAGAACGCCAACTTCCTCATAAAGGAAGGCGAGAAAGTGAAGAAACTCGCAGAGCAGTATGTTGAAGCAGCCCAACACAATAGGAAAAATTGA 3798 0.4152 MNLSTPIHRVFVRLHYWIWFCFVCIDNWASITNLCPLCQNEFQLITCVPVYDTIGSNKIEDDVLSRDDDWSIEGRNNTLSFPSYYIDENAVVCLDGDGCKIRSGSATIEGDLSLDTSIACDSCDMWYHAFCVGFDPEGTSDVTWLCPRCVPDKVTENMDASSLEKTTMEINPENGDKECQAEESFSGKVSVSVADAGETAVVVSLVEGTQWSPVSREEGLSPLEACQNPMTESCSSISDVNNHQSNTEKTVNSPGVQQELELSLSHNVGCSLSSNTLGPDDLKKGTSGERSDPSSLSGTKIFNESHDRASTSRNGSDMGLHLGLSVGSFLCVDDADMNATRDQETDLQQSSLEDFILKGDEMEPNALNDNARVNGEKRKHADYSNDEVRIEVDRDAELKPEVEVSQKKLKTDGSVLTNHENGAGAHLSDDTKTNPSTTPISSHDDVKHHSTKENAASDIMSIVKGTKWKPSKEISGSKSCDKLSKNNENMAGLRVKKIMKRASDHGELSLVQNLRAEIREAVRNKSSKSFEENLFDTKLLAAFRAAVAGPKTEPLNKLPPMALKAKKSMLQKGKVREHLTRKIFGNSNGRRKRAWDRDCEIEFWKYRCSRAAKPEKIETLKSVLDLLRTSPESAEAKEGPEGQAKNSILSRLYLADTSVFPRKDDVKPLSVLETAANSEQNEKHNLSGKASNQSLGNSPIKAKEINNVLPKARDCLSENKVNNKIVHSSVRGNSASGKVPSSRHSEGAAGSCPGDSRVESKESCVKSDCIKSDKRKWALEVLARKSAAAGKKMTNDNQEDNALLEGKYPLLAQLPADMRPALAPSRHNKIPISVRQTQLYRLTEHFLRNANLSVIRRTADTELAVADAINIEKEVADRSNSKLVYLNLCSQELLHRSSNRKSNGATDIIPQVSSSVPADGAEQHTDDDPSTDSAVQIALKNAGLSSDSPPCSPSEKREISNKQVDVSGPDNILELDFQPEMDIYGDFDYDLEDEDYIGAGVARGLNSQEEESESKMKLIFSTTNLRSSDTVLDCTDSESLENNDVPRDPSCSSNHDDAANADPAIDAETDNHPPAPSEALLSEPCDAECEELYGPEKEPLTKKFPNEEFITLHGEGKSGTSTEGNDCHNKEQASDQAVNASESGNDELAKNTPVTAIANNSSNASDISENLQREGEKSDTAPEQSDPANNVVRKVEAYVKEHIRPLCKSGVITAEQYRWAVAKTTEKVVKYHCKAKNANFLIKEGEKVKKLAEQYVEAAQHNRKN 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5336g00016 1265 MobiDBLite consensus disorder prediction 1112 1188 - -
Pral5336g00016 1265 MobiDBLite consensus disorder prediction 1036 1080 - -
Pral5336g00016 1265 MobiDBLite consensus disorder prediction 427 441 - -
Pral5336g00016 1265 MobiDBLite consensus disorder prediction 677 698 - -
Pral5336g00016 1265 MobiDBLite consensus disorder prediction 289 305 - -
Pral5336g00016 1265 MobiDBLite consensus disorder prediction 403 458 - -
Pral5336g00016 1265 PANTHER RING FINGER PROTEIN 41, 151 81 1256 - -
Pral5336g00016 1265 MobiDBLite consensus disorder prediction 930 957 - -
Pral5336g00016 1265 MobiDBLite consensus disorder prediction 1036 1057 - -
Pral5336g00016 1265 ProSiteProfiles Zinc finger PHD-type profile. 32 152 IPR019787 -
Pral5336g00016 1265 MobiDBLite consensus disorder prediction 726 759 - -
Pral5336g00016 1265 MobiDBLite consensus disorder prediction 233 257 - -
Pral5336g00016 1265 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 157 IPR013083 -
Pral5336g00016 1265 MobiDBLite consensus disorder prediction 273 317 - -
Pral5336g00016 1265 SUPERFAMILY FYVE/PHD zinc finger 115 154 IPR011011 -
Pral5336g00016 1265 MobiDBLite consensus disorder prediction 1115 1169 - -
Pral5336g00016 1265 MobiDBLite consensus disorder prediction 899 920 - -
Pral5336g00016 1265 MobiDBLite consensus disorder prediction 726 741 - -
Pral5336g00016 1265 MobiDBLite consensus disorder prediction 899 962 - -
Pral5336g00016 1265 Pfam PHD-finger 115 151 IPR019787 -
Pral5336g00016 1265 SMART PHD_3 98 150 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5336g00016 Pral-Chr5336 39887 48819 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pral5336g00016 PHD 3.1e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5336g00016 - - gmx:100808102 1498.03