Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5336g00004 ATGGACGCTGAAATCCAAGGACGAATTGAGACCACTGTTCGGAGGATTCTGGAGGAATCAGACATGGACGACGTCACCGAGTCCAAAGTCAGGAAGCAAGCCGCCAAAGAACTCGACCTCGACCTGTCGCGGCCGCACTACAAAGCCTTAGTGAAGCAGGTTGTGGAGGCTTTCATTCAGGAAAAGCAAGAGGAGCCGGAGGAGGAAGAAAATTCACAAGAGGATACTTCTCAGGGCCAGGAGTACGATGATGAGGGCAATCTCATCATCTGCAAGCTTTCAGCCCAGAGAAGGGTGACGATTCAAGAATTCAGAGGGAAAACATTGGTCTCTATCCGAGAGTACTATAGAAAGGACGGTAAAGAATTACCTTCTTCGAAAGGAATAAGTTTGACGGAGGAGCAGTGGTCAGCCTTGAAGAAGAATATACCTGCCGTAGAGAAAGCCATTCAGAAACTGGAGTCAAGCATATGA 474 0.4831 MDAEIQGRIETTVRRILEESDMDDVTESKVRKQAAKELDLDLSRPHYKALVKQVVEAFIQEKQEEPEEEENSQEDTSQGQEYDDEGNLIICKLSAQRRVTIQEFRGKTLVSIREYYRKDGKELPSSKGISLTEEQWSALKKNIPAVEKAIQKLESSI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5336g00004 157 MobiDBLite consensus disorder prediction 60 83 - -
Pral5336g00004 157 SUPERFAMILY ssDNA-binding transcriptional regulator domain 90 153 IPR009044 GO:0003677|GO:0006355
Pral5336g00004 157 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 155 IPR045125 GO:0003713|GO:0060261
Pral5336g00004 157 Pfam Transcriptional Coactivator p15 (PC4) 91 142 IPR003173 GO:0003677|GO:0006355
Pral5336g00004 157 FunFam RNA polymerase II transcriptional coactivator KELP 80 156 - -
Pral5336g00004 157 Pfam DEK C terminal domain 8 59 IPR014876 -
Pral5336g00004 157 PIRSF RNA_polymII_KELP 1 157 IPR017415 -
Pral5336g00004 157 Gene3D Transcriptional Coactivator Pc4; Chain A 79 157 IPR009044 GO:0003677|GO:0006355
Pral5336g00004 157 MobiDBLite consensus disorder prediction 62 81 - -
Pral5336g00004 157 SUPERFAMILY DEK C-terminal domain 8 60 - -
Pral5336g00004 157 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 3 60 IPR014876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5336g00004 Pral-Chr5336 18076 27344 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Pral5336g00004 PC4 1.7e-24 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5336g00004 K25815 - gmx:100305633 214.542