Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5334g00034 CCAAGGCTTGTGAAACCCTCAATCCCTCTCGTCTCCTTTCTGGAACGCCTCCAAGAAACAGCAGTTAACACCTTTGGCAGATCTAACGTCGACCCAAAAAACTACGTTGACATGTCGTTGAAGTTCAGCTTGTCTGAGACAGAGGAGGCATTTGATAAGCTTGCTAGGTCTGCAAATGGCTTTGTACCAGCAATAGAGTTGAATGATTTTATAGAAAAATACTTGGATGGAGCGGATGACGATATGGAGTACTACGAACCAGAGGATTACGTGGAAGAGCCAGAGGGATTCTTGCCCAAAGTTGAGCATCCAGAGGTGAGGGCATGGGCATTGAAAGTCCATTCCCTTTGGAAGAACTTGAGTCGCAGAGTTTCAAGTAGGGTCAAAAGTCATCCCCATTTGCATACTCTTCTTCCTCTGCCTGCTTCTTTCATCATCCCTGGTTCACGCTTTCGTGAGGTTTATTACTGGGATTCCTACTGGATAATCAGGGGCTTACTGGTGAGTAAAATGTACAAGACAGCCACTGGAATGATGACTAATCTTATTTCTTTGATAGAAGAATACGGGTTTGTGCCTAATGGTGCAAGAGCCTACTACACCCACAGGAGCCAGCCTCCCCTTTTAAGTGCTATGATTTATGAGATCTACAATGCCACTGGTGATATAGAGCTGGTCAAAAGATCGCTTCCTGCACTGAGGAAAGAGTATGAGTTTTGGAATTCAGAAATACATACGGTGACCATTGTGGACCCTCAAGGTTGTACTCACACCTTAAATCGTTACTATGCAATGTGGAATAAACCCAGGCCAGAGGGTTCAGTAAAGGACAAGAGATTTGCTTCCAAGTTCTCGGATGCTTCAGAAAAACAACACTTTTACCATGAAGTGGCTTCAACTTGTGAATCAGGATGGGATTTCAGCACAAGATGGTTGAGAGATCCGTTAGAATTTACATCAGTGGCTGCAACTTCTGTAATACCTGTTGACCTAAATGCATTTATTCTTGGGATGGAACTTAATATTGCATTTTTTGCAAAAGTTACTGGAGATAATAGCACTGCTCAGCACTTCCTGCAACTTTCTGATAGTAGAAAGAAGGCACTCAACTCTGTTTTCTGGAACGCAAACATGAAACAATGGCTTGATTACTGGCTCACAAATAGTACATGCCAGGGAGTTCAAGTCTGGGAAGATCAGCAGCAGAATCACAATGTATTTGCTTCCAACTTTGCTCCTTTATGGATGGAACCATTTTACTCAGATTCTTCGATCGTGGGTAGCGTTGTTGAAAGTCTCAAAACTTGTGGGCTGGTTCGTGCTGCTGGGGTTGCGACATCTTTGACAAATTCAGGACAACAATGGGACTTCCCAAATGGCTGGCCCCAAATTCAACATATGATAGTTGAAGGTCTGGTGAAATCTGGGTTGAAAGAAGCAGCTTCACTGGGGGAAGAAATTGCAAGGAGATGGATCACAACCAACTATATGGCCTACAAGAAAACAGGTGTGATGCATGAAAAATATAATGTGGAGCATTGTGGAGAGTTTGGAGGCGGTGGACTATATGTGCCCCAGACTGGTTTTGGGTGGTCAAATGGAGTGGTGCTTGCTTTCTTGGAGGAGTTTGGATGGCCTCAAGATCGCGATATTGACTGTTCATTGATTTCCTCAGAAATTGACAATATTGGCAATTGA 1698 0.4364 PRLVKPSIPLVSFLERLQETAVNTFGRSNVDPKNYVDMSLKFSLSETEEAFDKLARSANGFVPAIELNDFIEKYLDGADDDMEYYEPEDYVEEPEGFLPKVEHPEVRAWALKVHSLWKNLSRRVSSRVKSHPHLHTLLPLPASFIIPGSRFREVYYWDSYWIIRGLLVSKMYKTATGMMTNLISLIEEYGFVPNGARAYYTHRSQPPLLSAMIYEIYNATGDIELVKRSLPALRKEYEFWNSEIHTVTIVDPQGCTHTLNRYYAMWNKPRPEGSVKDKRFASKFSDASEKQHFYHEVASTCESGWDFSTRWLRDPLEFTSVAATSVIPVDLNAFILGMELNIAFFAKVTGDNSTAQHFLQLSDSRKKALNSVFWNANMKQWLDYWLTNSTCQGVQVWEDQQQNHNVFASNFAPLWMEPFYSDSSIVGSVVESLKTCGLVRAAGVATSLTNSGQQWDFPNGWPQIQHMIVEGLVKSGLKEAASLGEEIARRWITTNYMAYKKTGVMHEKYNVEHCGEFGGGGLYVPQTGFGWSNGVVLAFLEEFGWPQDRDIDCSLISSEIDNIGN 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5334g00034 565 Gene3D - 17 554 IPR012341 GO:0005975
Pral5334g00034 565 PRINTS Glycosyl hydrolase family 37 signature 369 385 IPR001661 GO:0004555|GO:0005991
Pral5334g00034 565 PRINTS Glycosyl hydrolase family 37 signature 294 311 IPR001661 GO:0004555|GO:0005991
Pral5334g00034 565 PRINTS Glycosyl hydrolase family 37 signature 447 463 IPR001661 GO:0004555|GO:0005991
Pral5334g00034 565 PRINTS Glycosyl hydrolase family 37 signature 527 540 IPR001661 GO:0004555|GO:0005991
Pral5334g00034 565 PRINTS Glycosyl hydrolase family 37 signature 189 207 IPR001661 GO:0004555|GO:0005991
Pral5334g00034 565 PRINTS Glycosyl hydrolase family 37 signature 259 276 IPR001661 GO:0004555|GO:0005991
Pral5334g00034 565 PRINTS Glycosyl hydrolase family 37 signature 326 343 IPR001661 GO:0004555|GO:0005991
Pral5334g00034 565 PANTHER TREHALASE 10 554 IPR001661 GO:0004555|GO:0005991
Pral5334g00034 565 Pfam Trehalase 30 544 IPR001661 GO:0004555|GO:0005991
Pral5334g00034 565 SUPERFAMILY Six-hairpin glycosidases 25 547 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5334g00034 Pral-Chr5334 181651 185461 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5334g00034 4 553 Trehalose Biosynthesis Gene Families AT4G24040 56.859 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5334g00034 K01194 - gmx:547539 858.596