Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5334g00031 ATGGTTGGAGCTCAGATGGGTTCGTCGCTTTGGAATAGTCTCAAATGTCTTTGTTCCGCTCATGGTTGGTCTTACGCCGTTTTCTGGCGCTCTCATCCTCCTGATTCCTTGTTCCTGTCTGTGGAAGATGCTTACTACGAAGGCCAGCTGGGACACGAAATTACTAAGACGATTCCGCAGCTTCATTTCCTGGGTGAAGGAATTGTTGGTCAAGTTGCTTTTACTGGCACTCGCAGATGGATTTTCTCAGATGCTCAAACCCAAGAGTGGAATTCAACTGGTGTCTTTGGAGGTCTAGATCATTGTGAGCTTGATTCTGACTTGCGTCAACAATTCTCCTCTGGGATCAAGACTATAGCTGTGATATCTGTTAAACCATTGGGAGTAGTACAACTTGGATCCACACAGAAGATCTCGGAGAGAGAGGAAATTTTGGAACAAACACAAAGACTGTTCATGGAGACGGACAATTTCGATGCAGTTGACGCAACAGCAAATATGGTTTTAGCTTGGGATTTTGAAAATTATGATCTGAATGGATTGTTGGCCTCTGAAAACTTGTGTTCTTGGAATCTCAGCCCTGAAGATGACAATAACATCAATGGGGGAATGAGAAATGCTTGTTTTTCAACAGGCATGGATAATTCTCTCCTCTCCACTTTTAAGAATCAAGAAGATGGAATGACCAACTTGCATGGGGAATCTTCTTGTCTCAGCGATCAGTTGACAACAGCCGCAGAAGCTCAAATAGGATTATCAGAGAAGGATAGTTTTGAAGTTCTCTTAAATCCTAACTCTTGCGTGAAAACCCATGTTTTGGCACACAGAGCAGTGAAGTTTCTTTGGCTTCATCAATGGCTCAAGATGTTGCTGCTGAGGATTCAGTTCACTTCTTCTCCAGAACATAGCACCTGTGCAACAAACAACACTACATTGGAAAATTCTCTTTCTCAATCCTTAGAATTCAATCCCACTTTTGTTGCCTTAAGTGGTGATCTGCTAAAAAATTTCTCGGATGGACACCAAACGCCTACCCTTATGCATACTTTTGAAAGCAATACCGGCCTTGATTTTGTTGGTGAGTGCTGGGGGAATATGATTGCACCAATGGTGAAATCTGCTACTGACACTGCTTCATCTCGACGCCAATCAGAGTTGAATACTGTTACACCTAATCATGCCGCCAAGAAGGGATTGTTCGCAGAGCTCGGCATTGAAGAGCTTTTGAATGGTGGATCCAGTTTTGAGGATCAGATTTCTACTACTAAAAGGCGTAGGACAGATTCATCCGGGAGTACTAATCCTGTTTCTAATTTGGACAAGACAAACCATCTTGTACACAAGAAAGAGATATTTCCTAAGTCGGTGATAGGGTCGTGGATGGACCATAGCCATTGCTTCAATGGTGTTAAGGTTGTTCCTCAAAAGCCAGAGGAATCCACAAAGGTCTCAAGGAAGAGGGCTAGGCCAGGAGAAAGTACTCGACCCCGACCAAAAGATCGCCAGCAGATCCAAGACCGTATTAAAGAGTTGAGAGGGATCATCCCCAGTGGTGGAAAGTGTAGCATTGACTCTTTGTTGGATCGCACCATCAAATACATGCTTTTCTTACAAAGTGTCACAAAATATGCAGACAAGCTGCAAGAGCCTGAAAGCCCTAAGCTCATAGAGGAGGCAAACAGTACGGTTGCAAAGAGCAAAAGTATGGGAGAATCCGATATCAAGGGTGGCGGTTGTGGTGGAGTTACATGGGCGTTTGAAGTTGCAGGTCAAAAAATGGCATGCCCGATTGTAGTGGAGGACATGAACCAACCAGGTCAAATGCTCATAGAGATGCTTTGTGAGGAGCAGGGCTTGTTCCTCGAGATAGCCGAAATAATCCGTGGATTTGGACTGAACATTCTTAAAGGAAAGATGGAAATTAGGGACAACAAGTTATGGGGACGCTTCATTGTTGAGGCAAGCAGACATGTAACAAGGATTGACGTATTTTGGTACCTAGTTCAGCTTCTACCGCAGACAAATGCATCTGGAATGGATAATTATCAGAAAACTGATATGACACTTCCTGCTATGGCCATGACTTGA 2088 0.4377 MVGAQMGSSLWNSLKCLCSAHGWSYAVFWRSHPPDSLFLSVEDAYYEGQLGHEITKTIPQLHFLGEGIVGQVAFTGTRRWIFSDAQTQEWNSTGVFGGLDHCELDSDLRQQFSSGIKTIAVISVKPLGVVQLGSTQKISEREEILEQTQRLFMETDNFDAVDATANMVLAWDFENYDLNGLLASENLCSWNLSPEDDNNINGGMRNACFSTGMDNSLLSTFKNQEDGMTNLHGESSCLSDQLTTAAEAQIGLSEKDSFEVLLNPNSCVKTHVLAHRAVKFLWLHQWLKMLLLRIQFTSSPEHSTCATNNTTLENSLSQSLEFNPTFVALSGDLLKNFSDGHQTPTLMHTFESNTGLDFVGECWGNMIAPMVKSATDTASSRRQSELNTVTPNHAAKKGLFAELGIEELLNGGSSFEDQISTTKRRRTDSSGSTNPVSNLDKTNHLVHKKEIFPKSVIGSWMDHSHCFNGVKVVPQKPEESTKVSRKRARPGESTRPRPKDRQQIQDRIKELRGIIPSGGKCSIDSLLDRTIKYMLFLQSVTKYADKLQEPESPKLIEEANSTVAKSKSMGESDIKGGGCGGVTWAFEVAGQKMACPIVVEDMNQPGQMLIEMLCEEQGLFLEIAEIIRGFGLNILKGKMEIRDNKLWGRFIVEASRHVTRIDVFWYLVQLLPQTNASGMDNYQKTDMTLPAMAMT 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5334g00031 695 MobiDBLite consensus disorder prediction 471 503 - -
Pral5334g00031 695 MobiDBLite consensus disorder prediction 425 440 - -
Pral5334g00031 695 MobiDBLite consensus disorder prediction 416 440 - -
Pral5334g00031 695 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 501 543 IPR036638 GO:0046983
Pral5334g00031 695 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 59 152 IPR025610 -
Pral5334g00031 695 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 49 IPR025610 -
Pral5334g00031 695 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 488 537 IPR011598 GO:0046983
Pral5334g00031 695 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 215 684 IPR043561 GO:0003700|GO:0006355
Pral5334g00031 695 MobiDBLite consensus disorder prediction 478 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5334g00031 Pral-Chr5334 153338 157374 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5334g00031 405 691 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 43.366 5.15e-67 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5334g00031 - - pcin:129323080 968.763