Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5334g00025 ATGGGAGGTCCGAGGGCTTTTGCCAGAAACAACATGTTCTTCATCATATGTCTGCTTACGTTGTTTCTCCAAACAAAGGTATTATGCGTAACGTACAAGGTTGGAGATTTAGATGGTTGGGGAATCCCCGCCTCTTCAAACCCAGACGTCTACACCAAATGGTCCAAACATCTCAATCTCAAGATCGGAGATTCCATCTGGTTCTTGTATCCACCAAGTCAAGATTCAGTGATCCAAGTGACGGCTGAGTCTTACAAGAGTTGTAACCTTAAAGATCCCATACTGCACATGAACGACGGTAACTCCCTGTTCAACATAACTTCAAATGCAGTATACTACTTCACCAGTGGAGAAGCAGGGCATTGCCAGAAGAAGCAGAAGCTTCGTATTGTTGTTGGTGACGGTAAGGACGTTTTGCCGTCTGATGCTCCGACTGCTTCATTGACGGGAAACGCGGCCGACGCGCCTTCCTATCCCACTGTGTTTGGAAGCATTCCTGTTACGGCTTCTTCTTCTGCTCCTTCCTTGTCTTCTTCTTCTGTTTCCTGTCTTTTCTTCTTTCTGGGATTGGTCCTCTCTCTATTTCATTAG 591 0.4602 MGGPRAFARNNMFFIICLLTLFLQTKVLCVTYKVGDLDGWGIPASSNPDVYTKWSKHLNLKIGDSIWFLYPPSQDSVIQVTAESYKSCNLKDPILHMNDGNSLFNITSNAVYYFTSGEAGHCQKKQKLRIVVGDGKDVLPSDAPTASLTGNAADAPSYPTVFGSIPVTASSSAPSLSSSSVSCLFFFLGLVLSLFH 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5334g00025 196 Gene3D - 30 142 IPR008972 -
Pral5334g00025 196 Pfam Plastocyanin-like domain 49 125 IPR003245 GO:0009055
Pral5334g00025 196 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Pral5334g00025 196 PANTHER BLUE COPPER PROTEIN 28 161 IPR039391 GO:0009055
Pral5334g00025 196 FunFam Early nodulin-like protein 1 29 137 - -
Pral5334g00025 196 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5334g00025 Pral-Chr5334 135495 137207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5334g00025 3 167 Phytocyanin Superfamily AT1G64640 50.299 4.41e-51 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5334g00025 - - gmx:100527517 209.149