Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5333g00028 ATGTCAAACACAAAGCCGGAGCAATGGCAGTGGGAAAACGCCACTGCCGGCGCCGTTGCGGGGTTTGCTACCGTCGTTGTCATGCATCCCCTAGACGTTGTCCGAACTAGGTTCCAAGTTAATGATGGTCGAGTTCCCTTTGTTCCCAGTTATAAGAATACTGCTCACGCCGTTATCACCGTTGCTCGCTCAGAGGGCTTAAGAGGTCTTTACGCAGGCTTGCTTCCTGCAGTCCTTGGGTCAACTATTTCATGGGGTCTATACTTCTATTTCTATGACAAAGCCAAACAAAGGTATGCGAGGAACAGGGAGGAGAAGCTGAGCCCTGGTTATCATCTTGCTTCAGCCGCTGAAGCAGGGACTTTGGTTTGCTTATGCACAAATCCTGTTTGGCTAGTAAAAACAAGAATGCAGCTTCAGAATCCTCTGCATCAAGCACAACCGTATAATGGGATTTATGATGCATTTAAAACCATCATGAAAGAAGAAGGATTGAGGGCATTGTACAGAGGAATTGTTCCTAGTCTTTTTCTGGTCTCTCATGGTGCCATGCAGTTCATGGTATATGAAGAGCTTCGGAAGATGATTGTAGATTTGAAGAGCAAGGAAAGTGAGATGCATCATCAAAAACCCGATAAGCTGTTGAATTCTATGGATTACGCTGTTCTTGGAGCAACTTCAAAAGTTGCTGCCACTCTTATAAGCTATCCGTTTCAGGTCCTACGGGCTCGATTGCAGCAACGGCCAAGTGTTGATGGGATTCCAAGATATATGGATAGTTGGCACGTCGTGAAGGAAACTGCACGGTTTGAAGGTGTTCGAGGTTTTTACAAAGGGATCACCCCAAGCCTAATGAAAAATGTTCCTGCTTCATCAGTAACATTTATTGTCTATGAAAATGTGCTTAAATTGCTTAAACTAACTAGAAGGAATGACTAG 939 0.4462 MSNTKPEQWQWENATAGAVAGFATVVVMHPLDVVRTRFQVNDGRVPFVPSYKNTAHAVITVARSEGLRGLYAGLLPAVLGSTISWGLYFYFYDKAKQRYARNREEKLSPGYHLASAAEAGTLVCLCTNPVWLVKTRMQLQNPLHQAQPYNGIYDAFKTIMKEEGLRALYRGIVPSLFLVSHGAMQFMVYEELRKMIVDLKSKESEMHHQKPDKLLNSMDYAVLGATSKVAATLISYPFQVLRARLQQRPSVDGIPRYMDSWHVVKETARFEGVRGFYKGITPSLMKNVPASSVTFIVYENVLKLLKLTRRND 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5333g00028 312 SUPERFAMILY Mitochondrial carrier 10 300 IPR023395 -
Pral5333g00028 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 98 IPR018108 -
Pral5333g00028 312 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 308 IPR044712 GO:0006862|GO:0055085
Pral5333g00028 312 FunFam Folate transporter 1, chloroplastic 104 310 - -
Pral5333g00028 312 Pfam Mitochondrial carrier protein 9 102 IPR018108 -
Pral5333g00028 312 Pfam Mitochondrial carrier protein 107 197 IPR018108 -
Pral5333g00028 312 Pfam Mitochondrial carrier protein 218 306 IPR018108 -
Pral5333g00028 312 PRINTS Mitochondrial carrier protein signature 71 89 IPR002067 GO:0055085
Pral5333g00028 312 PRINTS Mitochondrial carrier protein signature 23 41 IPR002067 GO:0055085
Pral5333g00028 312 PRINTS Mitochondrial carrier protein signature 116 138 IPR002067 GO:0055085
Pral5333g00028 312 Gene3D Mitochondrial carrier domain 1 196 IPR023395 -
Pral5333g00028 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 304 IPR018108 -
Pral5333g00028 312 FunFam folate transporter 1, chloroplastic isoform X1 1 103 - -
Pral5333g00028 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 195 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5333g00028 Pral-Chr5333 163075 168547 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5333g00028 30 306 Chloroplast and Mitochondria Gene Families AT1G25380 33.333 4.45e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5333g00028 K15115 - gmx:100809599 509.22