Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5331g00111 ATGCCTCCTCTTCTCTTTCTACTGGTGCTCTGCGCACCGTTCCTAACCTGCGCCGCTCGAAGCAGCGTCGCCATTGCTGAGATCGCGGCCCTGACGTCCTTCAAGCTCAACCTTCAGGATCCTCTCGGCGCTCTCAACGGTTGGGATCCTTCCACGCCGGCAGCTCCTTGCGATTGGCGCGGAGTCGCTTGTTACAGCAACAGGGTCACGGAGTTGCGTCTGCCTCGGCTTCAACTCAGCGGCCGGCTTACTGACCGTCTTTCCGACTTGCGTATGTTGCGGAAGCTGAGCCTTCGCTCTAACTCCTTCAACGGGACCATTCCCTCGTCGCTTGGTAAATGTGCCTTCCTGCGCGCCGTGTTTCTACAGTACAACTCATTCTCTGGCACTCTCCCGCCGGAGATCCGAAACCTGACCGGCCTTCAGATTCTTAATGTCGCGCAAAACCACCTCTCCGGCAGAGTCCCCGGCGACCTCCCGTTGAGCCTGAAGTACGTCGACCTCTCGTCGAACTCCTTTTCTGGCGAGATTCCAAGTGCTGTTGCCAACCTTTCTCAGCTCCAGCTAATCAACCTGTCCTACAACCAGTTCTCGGGAGCGATTCCGGCGAGCTTTGGCCAGCTTCAGCAGCTCGAATCTTGGCTTGATCACAATCTTTTGGGAGGAACTTTGCCTTCGGCACTCGCTAACTGCTCTTCCCTCGTGCATCTGAGCGTAGAAGGAAATATACTTGGAGGAGTGATTCCGGCGGCCATTGCAGCTCTTCCGAGGCTTCAGGTGATATCTCTCTCTCATAATAATCTTACCGGATCGATCCCGGCTTCCATGTTCTGCAACATTTCGGTCTACACGCCGTCTCTTCGAATCGTTCAGTTAGCATTTAATGGTTTCACGGATATTGTCGAGCCGCAGGCATCAACGTGTTTCAGTGTTCTTCAGGTCTTGGATATACAGCACAATAGCATACATGGCACGTTTCCCTTGTGGATAACGAATATGTCCACGTTAACGATGCTTGATGTTTCAGATGCATTTTCTGGCCAGATTCCGTCAGAAATTGGAAGCCTCGCCAAAGTGGAGGAGTTAAGGATGGCCAACAATTCATTTACTGGGATGATTCCAGAAGAGATCAAGAAATGTGCTTTTCCTTCGTTTTTTGGTTATATGTCAGGTCTGAAGGTGCTGTCCCTTGGAGGGAATCTTTTCTCTGGTTCAGTTCCGGAGAGTTTTGGTAACCTTTCGGCGCTGGAAACCCTGAGTATGGGAGGTAATAACTTGAATGGAACCGTACCTGAGCAAGTCATGGGATTGAGCAATATTTCAAGTCTTAATCTTAGCGGAAATAAGTTTACGGGTCAAATATCTCCAAGTATTGGGAACCTGAGTCGATTAATGGTTCTCAATCTGAGTGGCAACGGCTTTTCTGGAAAAATCCCTGCTAGTTTGGGGAATCTTTTCAGGCTAACTACGCTTGACTTGAGTAAACAAAATCTTTCTGGAGAGTTACCATTTGAGCTTTCAGGATTGCCAAATCTGCAAGTTATTGCTTTGCAGGAGAACAGATTATCTGGGGACGTTCCTGAAGGGTTTAGCAGTTTGATGAGTCTGCGATATGTGAACCTGAGCTCTAATTCGTTTTCGGGGCATATTCCTCAAAATTATGGCTTTCTTCGATCACTGGTTGCTCTTTCTTTGTCTGACAATCACATTACAGGAATAATTCCTCCGGAGATAGGAAACTGCTCCGATATGGAGATTCTTGAGCTTGGTTCAAATTCTTTGACAGGTCATATTCCAACTGATCTCACTCGACTCGCGCATTTGAGAGAGCTTGATTTGAGTAGAAACAATTTAAGTGGAGATATACCCGGCGATATCTCCAAATGTTCATCCTTAAATGCTCTGCTGGCGGATCACAACCGTCTTTCAGGCACTATACCGGAGTCACTGTCCGAGTTATCAAACCTGGCAATGCTGGATCTCTCTGCTAACAACTTGAGTGGGGAAATATCGAGTAATATTTCCATGATGCCTAATTTAGTGTCCTTCAATGTCTCGGGAAATAACCTGGAAGGTGAGATACCGCCAACCTTGGGCGCTCGGTTCAACAATGCCTCTGCATTTGCGGATAATCAGAACTTATGTGGGAAGCCGCTGAATAGGAAGTGTGAAAATGTAGTTAGTAGGGACAGGAAGAGGTTGATTGTGTTGATTGTCGTAATTGTTGCTGGAGCTTGCTTACTATTGCTGTGTTGCTGCTTCTACATATACAGCCTTTTGCGGTGGCGTAAAAGGCTTAAGGAACGGGCGTCTGGGGAGAAAAAAAGGAGTCCTGCTAGGGCGAGTTCTGGAGCGAGTGGAGGTCGAGGCAGCACTGATAATGGGGGACCAAAGCTGGTCATGTTTAATACTAAAATTACACTTGCTGAAACCATTGAAGCAACCAGGCAGTTTGACGAAGAAAATGTGCTGAGCAGAACAAGGTATGGATTGGTATTCAAGGCCTGCTACAACGACGGAATGGTGCTTTCAATTCGCAGACTCCAAGATGGATCGCTGGACGAAAATATGTTCAGGAAAGAAGCAGAATCACTAGGGAAAGTGAGGCACCGAAATTTAACCGTTCTTAGAGGTTACTATGCCGGGCCACCAGACATGAGGCTACTGGTCTATGACTACATGCCCAATGGAAACCTTGCAACCCTCCTTCAAGAAGCTTCTCATCAGGATGGTCATGTTCTGAATTGGCCAATGCGCCACCTCATTGCGCTTGGGATTGCTCGTGGCTTAGCTTTCCTACACCAGTCCTCACTGGTTCATGGGGACGTGAAACCACAGAGTGTCCTGTTCGATGCTGATTTTGAAGCCCATTTGTCAGATTTTGGGCTCGACCGTCTTACAGTAGCCACCCCTGGCGAACCCTCCACCTCGACCTCAGTTGGCACATTGGGTTACGTATCACCTGAAGCTGCAGTAACAGGGGAAGCCACAAAAGAGTCTGATGTGTACAGCTTTGGCATAGTGTTGCTCGAGCTTCTTACAGGAAAGCGACCGGTGATGTTCACGCAGGATGAAGATATAGTGAAATGGGTAAAGAAACAGCTGCAAAGGGGTCAAATCACGGAGTTGTTGGAGCCAGGATTGCTTGAGCTTGATCCAGAATCGTCCGAGTGGGAAGAGTTCTTGCTCGGTGTGAAAGTAGGCTTGCTCTGCACAGCACCCGACCCTCTCGATCGGCCAACCATGTCTGACATCGTGTTCATGCTTGAAGGCTGCCGCGTCGGACCCGACATCCCATCCTCCGCCGATCCCACCTCTCAACCTTCGCCGGCGTGA 3336 0.4895 MPPLLFLLVLCAPFLTCAARSSVAIAEIAALTSFKLNLQDPLGALNGWDPSTPAAPCDWRGVACYSNRVTELRLPRLQLSGRLTDRLSDLRMLRKLSLRSNSFNGTIPSSLGKCAFLRAVFLQYNSFSGTLPPEIRNLTGLQILNVAQNHLSGRVPGDLPLSLKYVDLSSNSFSGEIPSAVANLSQLQLINLSYNQFSGAIPASFGQLQQLEYXWLDHNLLGGTLPSALANCSSLVHLSVEGNILGGVIPAAIAALPRLQVISLSHNNLTGSIPASMFCNISVYTPSLRIVQLAFNGFTDIVEPQASTCFSVLQVLDIQHNSIHGTFPLWITNMSTLTMLDVSXDAFSGQIPSEIGSLAKVEELRMANNSFTGMIPEEIKKCAFLXSFFGYMSGLKVLSLGGNLFSGSVPESFGNLSALETLSMGGNNLNGTVPEQVMGLSNISSLNLSGNKFTGQISPSIGNLSRLMVLNLSGNGFSGKIPASLGNLFRLTTLDLSKQNLSGELPFELSGLPNLQVIALQENRLSGDVPEGFSSLMSLRYVNLSSNSFSGHIPQNYGFLRSLVALSLSDNHITGIIPPEIGNCSDMEILELGSNSLTGHIPTDLTRLAHLRELDLSRNNLSGDIPGDISKCSSLNALLADHNRLSGTIPESLSELSNLAMLDLSANNLSGEISSNISMMPNLVSFNVSGNNLEGEIPPTLGARFNNASAFADNQNLCGKPLNRKCENVVSRDRKRLIVLIVVIVAGACLLLLCCCFYIYSLLRWRKRLKERASGEKKRSPARASSGASGGRGSTDNGGPKLVMFNTKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLQDGSLDENMFRKEAESLGKVRHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSLVHGDVKPQSVLFDADFEAHLSDFGLDRLTVATPGEPSTSTSVGTLGYVSPEAAVTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5331g00111 1114 SUPERFAMILY L domain-like 57 385 - -
Pral5331g00111 1114 ProSiteProfiles Leucine-rich repeat profile. 610 632 IPR001611 GO:0005515
Pral5331g00111 1114 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 474 1095 - -
Pral5331g00111 1114 Gene3D Ribonuclease Inhibitor 160 386 IPR032675 -
Pral5331g00111 1114 Gene3D Ribonuclease Inhibitor 387 729 IPR032675 -
Pral5331g00111 1114 FunFam Putative LRR receptor-like serine/threonine-protein kinase 784 896 - -
Pral5331g00111 1114 SMART LRR_sd22_2 608 637 - -
Pral5331g00111 1114 SMART LRR_sd22_2 656 679 - -
Pral5331g00111 1114 SMART LRR_sd22_2 256 283 - -
Pral5331g00111 1114 SMART LRR_sd22_2 416 442 - -
Pral5331g00111 1114 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 216 459 - -
Pral5331g00111 1114 ProSiteProfiles Protein kinase domain profile. 821 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5331g00111 1114 Pfam Leucine rich repeat 561 621 IPR001611 GO:0005515
Pral5331g00111 1114 Pfam Leucine rich repeat 162 221 IPR001611 GO:0005515
Pral5331g00111 1114 Pfam Leucine rich repeat 394 453 IPR001611 GO:0005515
Pral5331g00111 1114 SMART LRR_typ_2 464 488 IPR003591 -
Pral5331g00111 1114 SMART LRR_typ_2 512 535 IPR003591 -
Pral5331g00111 1114 SMART LRR_typ_2 138 162 IPR003591 -
Pral5331g00111 1114 SMART LRR_typ_2 560 584 IPR003591 -
Pral5331g00111 1114 SMART LRR_typ_2 680 704 IPR003591 -
Pral5331g00111 1114 SMART LRR_typ_2 184 207 IPR003591 -
Pral5331g00111 1114 SMART LRR_typ_2 256 280 IPR003591 -
Pral5331g00111 1114 SMART LRR_typ_2 416 440 IPR003591 -
Pral5331g00111 1114 SMART LRR_typ_2 208 232 IPR003591 -
Pral5331g00111 1114 SMART LRR_typ_2 90 114 IPR003591 -
Pral5331g00111 1114 SMART LRR_typ_2 392 415 IPR003591 -
Pral5331g00111 1114 SMART LRR_typ_2 608 632 IPR003591 -
Pral5331g00111 1114 MobiDBLite consensus disorder prediction 774 801 - -
Pral5331g00111 1114 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 606 726 - -
Pral5331g00111 1114 Gene3D Phosphorylase Kinase; domain 1 797 896 - -
Pral5331g00111 1114 Gene3D Ribonuclease Inhibitor 25 159 IPR032675 -
Pral5331g00111 1114 SUPERFAMILY Protein kinase-like (PK-like) 801 1102 IPR011009 -
Pral5331g00111 1114 FunFam Uncharacterized protein 460 538 - -
Pral5331g00111 1114 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 182 - -
Pral5331g00111 1114 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 897 1100 - -
Pral5331g00111 1114 Pfam Leucine Rich Repeat 467 488 IPR001611 GO:0005515
Pral5331g00111 1114 FunFam LRR receptor-like serine/threonine-protein kinase 539 605 - -
Pral5331g00111 1114 PRINTS Leucine-rich repeat signature 656 669 - -
Pral5331g00111 1114 PRINTS Leucine-rich repeat signature 611 624 - -
Pral5331g00111 1114 SUPERFAMILY L domain-like 405 698 - -
Pral5331g00111 1114 Pfam Protein kinase domain 831 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5331g00111 1114 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Pral5331g00111 1114 Gene3D Transferase(Phosphotransferase) domain 1 897 1100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5331g00111 Pral-Chr5331 558017 562361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5331g00111 4 1114 Receptor kinase-like Gene Family AT4G36180 68.865 0.0 1497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Pral5331g00111 Pkinase 2.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5331g00111 - - gmx:100795838 1745.71