Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5331g00109 ATGATGGAACCGATGGAGTCATGTGTCCCACCGGGCTTTCGGTTCCACCCAACAGATGAAGAGCTTGTTGGTTATTATCTGAGGAAGAAAGTCGCCTCCCAGAAGATAGATCTTGACGTTATCAGAGAGATCGATCTATATCGCATTGAGCCATGGGATCTGCAAGACAGATGCAGGATCGGGTATGAGGAACAGAACGAATGGTATTTCTTCAGCCACAAAGATAAGAAGTATCCGACGGGGACGAGGACGAACAGAGCAACCGTGGCGGGGTTCTGGAAGGCGACTGGAAGAGATAAGGCAGTGTACGACAAGACCAAGCTCATCGGAATGAGGAAGACCCTTGTTTTCTACAAAGGAAGAGCCCCTAACGGACAGAAAACTGACTGGATCATGCATGAGTATAGGCTCGAATCTGATGAAAATGCACCCCCTCAGGAAGAAGGATGGGTGGTATGCAGAGCATTCAAAAAGAAAAACAATGGGCAAACGAAGACAATAGAAGGATGGGATTCAGGTTACTTTTATGAGGAGACAAGTGGAGTCGACTACGCATCAAGGCAGGCCCAGAGTTTCTTAGCTCCAAGTTTCCTGTGTAAGAAGGAGACAGAAGCAGATAATAACTTGAACTTCATGCACTCAGATCAGTTCGTACAGCTTCCTCAGCTAGAAAGTCCATCTCTGCCACTAATGAAGAGGCCAAGCTCAGCACTGGTGTCTTTCATATCACACAATAGTGACAACAATCATAACAAGAACGAAGAAGACGACCAGAACAGGCTGGTCAACAACAACGAAAACACGACCCAAAGGGTGACTGATTGGAGGGCTCTTGACAAATTTGTGGCTTCTCAATTGAGTCAAGATCAAGAGAGGCACGAGAGTAGTGATAATCATGGAATGTCAGGCTTTGAAACCCACGAGGCATTGCTCTTATTGCAGAGTAGTAGCGATGAAGGCAACAAGTTCAGCCCATTTTTAAATGGAAGCTCAGACTGTGACATTGGGATATGCGTGTTTGAGAAATGA 1029 0.4606 MMEPMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQDRCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENAPPQEEGWVVCRAFKKKNNGQTKTIEGWDSGYFYEETSGVDYASRQAQSFLAPSFLCKKETEADNNLNFMHSDQFVQLPQLESPSLPLMKRPSSALVSFISHNSDNNHNKNEEDDQNRLVNNNENTTQRVTDWRALDKFVASQLSQDQERHESSDNHGMSGFETHEALLLLQSSSDEGNKFSPFLNGSSDCDIGICVFEK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5331g00109 342 MobiDBLite consensus disorder prediction 242 268 - -
Pral5331g00109 342 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Pral5331g00109 342 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Pral5331g00109 342 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Pral5331g00109 342 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 284 - -
Pral5331g00109 342 FunFam NAC domain-containing protein 18 162 - -
Pral5331g00109 342 Coils Coil 251 271 - -
Pral5331g00109 342 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5331g00109 Pral-Chr5331 541179 545617 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5331g00109 2 341 NAC Transcription Factor Family AT2G18060 61.230 1.26e-157 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5331g00109 NAM 2.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5331g00109 - - aprc:113869508 542.347