Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5331g00086 ATGGAACCTCAACAGCAGCAAGCAGCAAACGAGGATGCTGGAGGGAGTGGAAGAGGAGGGTATTTGTGCAGGCAAAGCAGTACAAGGTGGACTCCCACAAGTGACCAGATAAGGATACTGAAGGACCTTTATTACAACAATGGAGTTAGGTCCCCAAATGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTATGGCAAGATTGAAGGCAAGAACGTCTTTTACTGGTTCCAGAACCACAAGGCTCGTGAACGCCAGAAGAAACGCTTCACCTCCACCTCTGATCATCTCCCCAGTCCCATGCACTTGCAAAGACCTCCTTCTTCCGCTACTACTAATTGGAAGCCTGACCACGAGTCCATTCTTCATCCGAAGTATTCTAACATACCGCCATCTCACGGCGTTTCTTCTGCTTCATCTTCTACTGCTGGGATGGTTTCCCTGGGCCAGATGGGGAACTATGGGTATGGATCTGTGACTATGGAGAAGTGTTTTAGGGACTGCTCAATATCAGCAGCAGGAAGCAGTGGCACCATAAGCCACAATTTGGGATGGGTAGGTATGGATCCATACTCAAACTACACTAACTTCTTGGACAAAATAAGGCCTGGCGATCAAGAAACGCTGAAAGAAGAACAAGAAGGAGAAGATGGAGCCCCTGAGATTGAAACTCTCCCTCTTTTTCCCATGCACGGTGAGGACGTCCACGGCTACTGCAACCTCAGGTCTGATTCTTCTTACTATGGCGGTGGCTGGTATCACGGCGATGAATATGGCTTCAAGAACAATGGCTCTCATCGTACTTCCCTCGAGCTCACTCTCAACTCCTACACCCGCAGATCTCCAGATTCAAGTTGA 864 0.4907 MEPQQQQAANEDAGGSGRGGYLCRQSSTRWTPTSDQIRILKDLYYNNGVRSPNAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSTSDHLPSPMHLQRPPSSATTNWKPDHESILHPKYSNIPPSHGVSSASSSTAGMVSLGQMGNYGYGSVTMEKCFRDCSISAAGSSGTISHNLGWVGMDPYSNYTNFLDKIRPGDQETLKEEQEGEDGAPEIETLPLFPMHGEDVHGYCNLRSDSSYYGGGWYHGDEYGFKNNGSHRTSLELTLNSYTRRSPDSS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5331g00086 287 CDD homeodomain 28 90 IPR001356 GO:0003677
Pral5331g00086 287 SMART HOX_1 25 93 IPR001356 GO:0003677
Pral5331g00086 287 SUPERFAMILY Homeodomain-like 21 93 IPR009057 -
Pral5331g00086 287 Pfam Homeodomain 27 88 IPR001356 GO:0003677
Pral5331g00086 287 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 6 280 IPR044555 GO:0003700|GO:0099402
Pral5331g00086 287 MobiDBLite consensus disorder prediction 1 27 - -
Pral5331g00086 287 MobiDBLite consensus disorder prediction 87 143 - -
Pral5331g00086 287 ProSiteProfiles 'Homeobox' domain profile. 23 89 IPR001356 GO:0003677
Pral5331g00086 287 MobiDBLite consensus disorder prediction 95 118 - -
Pral5331g00086 287 Gene3D - 27 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5331g00086 Pral-Chr5331 438370 439751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5331g00086 21 236 Wox Gene Family AT2G17950 44.269 1.28e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral5331g00086 Homeodomain 1.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5331g00086 - - gmx:100775555 381.719