Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5331g00081 ATGGATCAGTGGAAACCTGAAGATTTGTCTAAATCTGCATCTGTTGCAGCAGATTTAGCATCTTCTTCCCTTCAGCCTCAGTCGCAACTTGTGACCGTCACCCCTAGCCGCTTGCAGAATTCGCATACCGAAACCAGGCAGAGGCCTGAAGCTGAAGCACAGGATCCAGTTGCTGCAAGAAAACTCCAGAAGGCAGACCGCGAGAAACTGAGGAGGGATCGACTAAATGAGCATTTCCTAGAGCTGGGAAACACAATAGATCCAGATAGGCCAAAGAATGACAAGGCTACTATCCTTACAGACACAATTCAGGTGCTAAAAGATTTAACTGCTGAAGTCAACAGACTAAAAGCTGAGCATACTGCGCTTTCTGAAGAATCACAGGAACTGATGCAGGAGAAAAATGAACTCAGAGAAGAGAAGACATCTCTAAAATCTGACATTGAAAATCTTAATGCACAGTATCAGCAAAGAGTCAGAGTCACATTCCCATGGACTGCAATCGATCATTCAGTTGTCATGGCTCCACCGTATTCATATCCAGTTCCTATACCAGTTCCTTCCGGTCCAATTTCCCTTCATCCATCACTTCAGCCTTTTCCTTTCTATGGAAACCAAAATCCAGGACCGATTCCCAATCCTTGTTCCACATATGTCCCCTTTTCTGCTCCAGCTAATCCCCCAGCAGAGCAGCCAAGTGGCCAATATGCCTCGACATCCCGCACTTCAAGCAAACAAGATTCCAGAAGTAAGTCGCCAGATCATGAGAGGACCGGCAATGCTGAAAGATGTGGTGAGTCTAACGATGTAGCTACAGAGCTTGAACTTAAAATGCCTGGATCATCATTGCGGCAGGAATCATCTTCTGGAGCAAGGAAGGGCAAGCATTCATTAAGGAAGGCGAGAAATATCACAGATGGGAGTACTTCAAGCAGGCATTCTTCGTCTCAAGGACCTCAAGATAGCTCCAACAGCGTGGATGACATCCCCAAGTCTGATAAATCATAA 1008 0.4583 MDQWKPEDLSKSASVAADLASSSLQPQSQLVTVTPSRLQNSHTETRQRPEAEAQDPVAARKLQKADREKLRRDRLNEHFLELGNTIDPDRPKNDKATILTDTIQVLKDLTAEVNRLKAEHTALSEESQELMQEKNELREEKTSLKSDIENLNAQYQQRVRVTFPWTAIDHSVVMAPPYSYPVPIPVPSGPISLHPSLQPFPFYGNQNPGPIPNPCSTYVPFSAPANPPAEQPSGQYASTSRTSSKQDSRSKSPDHERTGNAERCGESNDVATELELKMPGSSLRQESSSGARKGKHSLRKARNITDGSTSSRHSSSQGPQDSSNSVDDIPKSDKS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5331g00081 335 MobiDBLite consensus disorder prediction 1 69 - -
Pral5331g00081 335 SMART finulus 65 115 IPR011598 GO:0046983
Pral5331g00081 335 CDD bHLH_AtILR3_like 64 138 - -
Pral5331g00081 335 MobiDBLite consensus disorder prediction 228 246 - -
Pral5331g00081 335 MobiDBLite consensus disorder prediction 15 42 - -
Pral5331g00081 335 MobiDBLite consensus disorder prediction 303 326 - -
Pral5331g00081 335 MobiDBLite consensus disorder prediction 43 69 - -
Pral5331g00081 335 Pfam Helix-loop-helix DNA-binding domain 60 109 IPR011598 GO:0046983
Pral5331g00081 335 Gene3D - 58 135 IPR036638 GO:0046983
Pral5331g00081 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 60 130 IPR036638 GO:0046983
Pral5331g00081 335 MobiDBLite consensus disorder prediction 214 335 - -
Pral5331g00081 335 Coils Coil 99 154 - -
Pral5331g00081 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 59 109 IPR011598 GO:0046983
Pral5331g00081 335 PANTHER TRANSCRIPTION FACTOR BHLH121 25 332 IPR044579 GO:0003700|GO:0006879
Pral5331g00081 335 MobiDBLite consensus disorder prediction 247 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5331g00081 Pral-Chr5331 411044 414591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5331g00081 50 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 58.475 7.70e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral5331g00081 HLH 5.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5331g00081 - - zju:107424369 437.958