Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5331g00064 ATGGCAGCTAAAGAAGATATAGAGGAAATTTCTTCTGAGAATTCTGTATATTCACCAGTTTCAACGACCTCACCAATGGGTAGCACATGCAGACTTGTATTTGACAGGTTATGGGCTCTTGCCTCTTCTTGCAAGACAAGCAGCACACCACGTGGTCGAAGAATTTTCCACAGAGATGTCGAAAAGGAAGAATTCCAGTATGCCAGTACTCAATGCCTCTCATCCTACTACAGTGTGTTCGTGGTTCGCCTGGCAATCATGGTCATGCTAGCCATCTTGATTGGGCTGCTCACTATATTAACATGGCATTTCACGAAGAGCTATACAGCAAAATCACTTGATAACTTAGCATATGGACTTCGTTATGAATTGCTACAACGCCCCATCTTACGGATGTGGAATATTTTGAATTCTACTGCTGAAATCACAAGAGCTCAGGTTGAGCTGTCTGAGTATGTAATCAGACGATACAGCAACCCTGCCAATCAAGCAGAACAAGTTGAGCTGTACGAAGCTATGAGGTCTGTGACCTGGGCCCTCTTTTCTAGCCGCAAGGCACTCAATTCAATAACTATCAATTACAGGAACGGCTTTGTTCAGGCATTCCACAGAGATCTTAAGGACAACAATACATTTTACATCTACTCCGATCTTGCAAACTACTCCATAGGTGCCAATGCCGCTAATGAGATGAAATCACTCTCAGCACATCAAGCTTGGAACGATGAAGCCATTCGCGGTAACAGTTCTGCAACTTGGTATCGTGAACCACTCGACCCTGTTAGTGGTGAGAAGATTGGAAAAGCTAAAAAGATTGCACCAGAAGACTTGATTAATATTGCTGGCCTTTCTCAAGTCCCTGACGGGGCAGCTTCATGGCATGTTGCTGTAAGCAAGTTTACAGATTCACCATTGCTTTCTGCTGCGCTGCCAGTTTGGGACTCTTCTAACAAGAGCATTGTGGCAGTTGTGGGTGTCACAACCGCACTTTATAGCGTTGGCCAGCTAATGAAAGAACTAGTTGAATTTCATAGTGGCTATATCTATTTGACCTCCCTAGAGGGTTACTTACTTGCTACTTCCACAAATGCTCCATTGCTGACAAATTCAAAGCCTCTGAAGCTTAAGATGGCTGTTGATTGTGAAGATGATGTAATACGATTGGGAGCCCAGTGGCTGAAGAGAACGTATGGGAAGAATTTTCCTCCGAGTCATGGGGTTCACCTAGAGAATGTCAAGCTAGGCCATCAGCAATATTACATCGACTCATTCTTTTTAAATTTGAAGAGGCTTCCTCTGGTGGGTGTTATCATTATTCCAAGAAAGTATATTATGGGGAAGGTTGATCAAAGAGCCTTCAAAACATTGGTTATTCTGATATCTGCATCTCTGTGTATTCTGGTCATTGGATGTGTTTGCATTTTAATTCTGACAAATGGGGTATCAAAGGAAATGAAACTAAGAGCAGAACTAATAAGACAATTGGAAGCAAGAAGGAGGGCAGAGGCATCAAGCAACTATAAAAGTCAGTTTCTTGCTAACATGAGTCATGAATTGAGGACACCTATGGCAGCAGTGATTGGGTTGCTTGACATTCTTATATCTGATGATTGTCTAACAAATGAACAATATGCAACAGTCACTCAGATAAGAAAATGCTCAACTGCATTACTCCGTCTCCTTAACAACATATTGGATCTCAGTAAGGTGGAATCCGGAAAATTGGTGTTAGAAAATGCAGAATTTGACTTGGGACGGGAACTTGAAGGACTTGTAGATATGTTTTCTGTGCAGTGCATTAACCACAACGTAGAGACTGTTTTGGACCTATCAGATGATATGCCAAAGTTAGTTCAGGGTGATTCTGCTAGGGTTGTTCAAATTTTTGCAAATTTGATCAACAATTCAATCAAGTTTACTCCATCTGGTCACGTTATTCTTCGAGGATGGTGCGAGAACCCGAATTGTTCCAGTGATATCCCAAATCTTCGTCTTAATCAGAAGTCCCGGGCTCCACAAAAGACCAGAATGAAGCAACAAGAAAACAATGCAAAGAAGGCGTCTAAAAGAGACAACCAAATAATTATCTGGTTTGAAGTAGATGACACGGGCTGTGGGATTGATCCGAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAACAAGCAGATCCATCGACCACTAGATTGCATGGAGGCACCGGTCTAGGACTCTGCATCGTGAGAACCTTGGTCAATAAGATGGGTGGAGAAATCAAGGTTGTTAAAAAGGAAGGCCCAGGAACACTGATGCGCTTGTACCTGCTTCTCAGTACACCCACGGATGCCACAGAACAACATTGTCAAATAGATTATGCGGAGAATGACTTAGTGGTATTGCTTGCACTACATGGAGACACGGGTCGATCTATCACATCTAAATGGTTACAGAAAAATGGGGCTTGCACTCTAGAGGCATCTGAATGGAATGAACTGACGCAAATTCTGAGGGAACTCTTCCATGCAAGTTCAGTCGACCGTAATGGTTTTGATGCACATTATGCAGTAAATAAGAGTTGGAAGTCCAAGTTACTCAGCATAGAAGAAATGAGGAACCCAGCATTTGTCATTATAGTGGACATAGGGCTGCTTGATTTGAGCACAGATATATGGAAGGAACAGCTCAACTTCCTTTACAAGTACTTTGGGAGAGCAAAGTTCGCATGGGTGCTAAATCATGACACTTCCAAGACCGTAAAGATGGAGCTTCGCAGGAAGGGGCATATATTGATGGTCAACAAGCCCCTTTACAAAACCAAAATGTTTCATATTTTGGAAGCTGTCATAAAGGAGAGAAATCTCGAGCTGCAAAAGAAAAATATGACTGCTTCAAGAACCACAGCGAAAGAGGGTGATGCACACGAGTTTCTGGATATTGATTCTACTCATTTTGATGGTGCTAGCTCTGATGGTTCTGACATATCCGAAATGGGTGCTTCTAATAGTTCCAATGGAGATAAACCAAGGGAAAAAATTGTAAAATCCCATCCACCATCACAGTACAAAAAAAACTGCTTCGTTGGATTAACTGATGACTGCACAGAAGTTAACATTTCAAGGAAAGAAGAATCATGTCAGACTAGCCCCAACTGCCATGACGTCCTTGAAGACACGGAGCCAAAATTACAAGCATCATTTTCAACAGAAGCTCAAGGAAAAGATTCTGGTTCTGGGAAAACATTTAGTGTCACTTGCTCAAGTAAAACTGTCAATGGAAAGAAATCCCTTGAAGGTCTGAGGATATTGCTTGCAGAAGACACTCCGGTACTTCAAAGAGTTGCAACCATAATGTTGGAAAAAATGGGGGCTACGGTTGTCGCAGTAGGTGATGGACAGCAGGCTGTGGATGCTCTGAATTGCATGCTCGGCCCTGAAGATAGTAGGAGGGAGTCTCTAATGGAGGAGAGAAGCGCAATATCTCAAACAGAAATTATCAGCTGTACACCTTATGATTTGATCCTTATGGATTGTCAGATGCCAAAGATGGATGGTTATGAAGCCACGAAAGCAATCAGGAAATCAGAAGCAGGAACTGGCTCGCACATTCCCATTGTTGCTCTCACAGCCCATGCAATGTCATGTGATGAGGCTAAGTGCCTGGAGGTGGGCATGGATGCTTATTTGACAAAGCCAATTGACTTCAAGCTGATGGTGTCCACCATCCTATCACTCACTAAAACAACATCCTGA 3726 0.4259 MAAKEDIEEISSENSVYSPVSTTSPMGSTCRLVFDRLWALASSCKTSSTPRGRRIFHRDVEKEEFQYASTQCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKSYTAKSLDNLAYGLRYELLQRPILRMWNILNSTAEITRAQVELSEYVIRRYSNPANQAEQVELYEAMRSVTWALFSSRKALNSITINYRNGFVQAFHRDLKDNNTFYIYSDLANYSIGANAANEMKSLSAHQAWNDEAIRGNSSATWYREPLDPVSGEKIGKAKKIAPEDLINIAGLSQVPDGAASWHVAVSKFTDSPLLSAALPVWDSSNKSIVAVVGVTTALYSVGQLMKELVEFHSGYIYLTSLEGYLLATSTNAPLLTNSKPLKLKMAVDCEDDVIRLGAQWLKRTYGKNFPPSHGVHLENVKLGHQQYYIDSFFLNLKRLPLVGVIIIPRKYIMGKVDQRAFKTLVILISASLCILVIGCVCILILTNGVSKEMKLRAELIRQLEARRRAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYATVTQIRKCSTALLRLLNNILDLSKVESGKLVLENAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVQGDSARVVQIFANLINNSIKFTPSGHVILRGWCENPNCSSDIPNLRLNQKSRAPQKTRMKQQENNAKKASKRDNQIIIWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRTLVNKMGGEIKVVKKEGPGTLMRLYLLLSTPTDATEQHCQIDYAENDLVVLLALHGDTGRSITSKWLQKNGACTLEASEWNELTQILRELFHASSVDRNGFDAHYAVNKSWKSKLLSIEEMRNPAFVIIVDIGLLDLSTDIWKEQLNFLYKYFGRAKFAWVLNHDTSKTVKMELRRKGHILMVNKPLYKTKMFHILEAVIKERNLELQKKNMTASRTTAKEGDAHEFLDIDSTHFDGASSDGSDISEMGASNSSNGDKPREKIVKSHPPSQYNXKNCFVGLTDDCTEVNISRKEESCQTSPNCHDVLEDTEPKLQASFSTEAQGKDSGSGKTFSVTCSSKTVNGKKSLEGLRILLAEDTPVLQRVATIMLEKMGATVVAVGDGQQAVDALNCMLGPEDSRRESLMEERSAISQTEIISCTPYDLILMDCQMPKMDGYEATKAIRKSEAGTGSHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKLMVSTILSLTKTTS 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5331g00064 1242 Gene3D - 476 571 - -
Pral5331g00064 1242 SMART HKATPase_4 620 771 IPR003594 -
Pral5331g00064 1242 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 620 769 IPR003594 -
Pral5331g00064 1242 CDD REC_hyHK_CKI1_RcsC-like 1094 1234 - -
Pral5331g00064 1242 ProSiteProfiles Histidine kinase domain profile. 514 771 IPR005467 -
Pral5331g00064 1242 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 495 574 IPR036097 GO:0000155|GO:0007165
Pral5331g00064 1242 Gene3D - 572 773 IPR036890 -
Pral5331g00064 1242 ProSiteProfiles Response regulatory domain profile. 1093 1238 IPR001789 GO:0000160
Pral5331g00064 1242 MobiDBLite consensus disorder prediction 977 998 - -
Pral5331g00064 1242 SUPERFAMILY CheY-like 1090 1238 IPR011006 -
Pral5331g00064 1242 MobiDBLite consensus disorder prediction 975 1010 - -
Pral5331g00064 1242 Pfam His Kinase A (phospho-acceptor) domain 508 573 IPR003661 GO:0000155|GO:0007165
Pral5331g00064 1242 Pfam Response regulator receiver domain 1094 1233 IPR001789 GO:0000160
Pral5331g00064 1242 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 562 767 IPR036890 -
Pral5331g00064 1242 PANTHER TWO-COMPONENT HISTIDINE KINASE 65 779 - -
Pral5331g00064 1242 PRINTS Bacterial sensor protein C-terminal signature 714 724 IPR004358 GO:0016310|GO:0016772
Pral5331g00064 1242 PRINTS Bacterial sensor protein C-terminal signature 696 710 IPR004358 GO:0016310|GO:0016772
Pral5331g00064 1242 PRINTS Bacterial sensor protein C-terminal signature 731 749 IPR004358 GO:0016310|GO:0016772
Pral5331g00064 1242 CDD HisKA 508 569 IPR003661 GO:0000155|GO:0007165
Pral5331g00064 1242 Gene3D - 1075 1240 - -
Pral5331g00064 1242 SMART HisKA_10 507 573 IPR003661 GO:0000155|GO:0007165
Pral5331g00064 1242 FunFam Histidine kinase 1-like protein 495 574 - -
Pral5331g00064 1242 SMART REC_2 1092 1234 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5331g00064 Pral-Chr5331 300994 307957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5331g00064 24 1242 Histidine Kinase Gene Family AT2G17820 65.024 0.0 1579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral5331g00064 HATPase_c 5.9e-22 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5331g00064 - - gmx:100814068 1934.46