Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5331g00033 ATGTTATCAAAGATGAAGGACTTTCTGAGCGCCTGTTGGCGACCATCCTCGGACCAATATGTCCACAAAGGTTCAGATGTGTCTGGTCGGCAGGAGGGATTACTTTGGTACAAAGACGCTGGCCAGCACTTAGCTGGTGAATTTTCGATGGCTGTTGTACAAGCCAACAATTTGCTTGAGGATCAGAGCCAAATAGAGACTGGTCCCCTTAGCTTGCTTGAGACTGGCCCCCATGGGACCTTTATTGGAGTATATGACGGTCACGGTGGACCTGAGACATCACGTTACATTTGTGATAATCTCTTCCAACACCTGAAACGTTTCACTTCTGAGCAGCAGTCCATGTCAGTGGATGTAATACAAAAAGCATACCAAGCAACGGAAGAGGGTTTTGTATCCCTTGTTAGCAAGCGTTGGCCTATAAATCCCCAAATTGCTGTTGTGGGATCATGCTGTTTGGTTGGTGTAATTTGTAGTGGTACCCTCTACATTGCTAACCTGGGCGATTCCCGTGCTGTGCTTGGGAGGGCTGTCAGAGCGACTGGAGAGGTTCTGGCAATCCAACTATCTTCAGAGCATAACGTGAGCATTGAATCTGTGAGACAAGAGATGCATTCTTTGCATCCAGATGACTCGCAAATCGTGGTTTTAAAGCACAACGTATGGCGCGTGAAGGGTCTGATACAGGTTTCTCGATCAATTGGTGATGTATATCTCAAAAGGGCAGAATTTAACAAGGAACCTTTGTATGCTAAGTTTCGTCTTCGTGAACCTTTTAGCAGACCAATTTTGAGCTCTGAGCCATCTATTTCTGTCCATGAACTTCAACAGCATGATCAGTTCCTCATATTCGCTTCTGATGGTTTGTGGGAACACCTTAGCAATCAGGATGCTGTTAACATAGTTCAAAATCACCCTCGCAGTCAGGGAAGTGCTCGGAGACTGGTCAAAGCTGCCTTGCATGAAGCAGCCAAAAAAAGAGAGATGAGATACTCAGATTTGAAGAAAATTGACCGTGGTGTCCGCCGCCATTTCCATGATGACATTACAGTAGTAGTTGTATTCCTCGACTCCAATCTTGTGAGCAGAGATGGGCCGGTGAGAGGTCCTTCTTTATCAGTGAGGGGTGGAGGTGTTAACCTACGCGCTAAAACACTGGCTCCCTGCGCAACTCCTTTGGAAACTTAG 1188 0.4638 MLSKMKDFLSACWRPSSDQYVHKGSDVSGRQEGLLWYKDAGQHLAGEFSMAVVQANNLLEDQSQIETGPLSLLETGPHGTFIGVYDGHGGPETSRYICDNLFQHLKRFTSEQQSMSVDVIQKAYQATEEGFVSLVSKRWPINPQIAVVGSCCLVGVICSGTLYIANLGDSRAVLGRAVRATGEVLAIQLSSEHNVSIESVRQEMHSLHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKRAEFNKEPLYAKFRLREPFSRPILSSEPSISVHELQQHDQFLIFASDGLWEHLSNQDAVNIVQNHPRSQGSARRLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRDGPVRGPSLSVRGGGVNLRAKTLAPCATPLET 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5331g00033 395 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Pral5331g00033 395 SMART PP2C_4 41 354 IPR001932 -
Pral5331g00033 395 CDD PP2Cc 48 356 IPR001932 -
Pral5331g00033 395 ProSiteProfiles PPM-type phosphatase domain profile. 44 356 IPR001932 -
Pral5331g00033 395 FunFam Phosphatase 2C family protein 36 365 - -
Pral5331g00033 395 Pfam Protein phosphatase 2C 78 325 IPR001932 -
Pral5331g00033 395 PANTHER PROTEIN PHOSPHATASE 35 354 IPR015655 GO:0004722|GO:0006470
Pral5331g00033 395 Gene3D - 33 364 IPR036457 -
Pral5331g00033 395 SUPERFAMILY PP2C-like 56 357 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5331g00033 Pral-Chr5331 175147 179869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5331g00033 1 384 PP2C-type Phosphatase Gene Family AT3G51370 75.521 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5331g00033 K01102 - mof:131156067 687.567