Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5331g00028 ATGGGTGATCAGCACCGCTGTTTATTGGCTGCTCCATCGCAGGAAATGGCAAAGCCATTCCATCCCAAAAGCAGTTGCTTCCAAACTGTGTTGGTATGGCTTGTTTCAGGCATTTTAACGGTAATGGTAGTTTCATTGTTGTACTGCCTCTTCAAGAGACTACTTAAATGCAAAAGGGAATTGAAGGCACTGAATGTTGCAGGTGCAATAGATGATAAGAGTTTGAAATATGATAATATATCGTTAAGGTGTTTTGATTTGGAGGCACTAGCGAAGGCTACAAACAATTTTAGCTCAGATTGCTTGCTGGGTTCTGGTGCGCTTGGAACGGTGTATAAAGGAACCTTCGAATCAGAAGGAACGTTGGCCATTAAAAGAGCTCACGGTGAATCATTCCTAGCCAAGGAAGAGTTCAGAAAAGGTCAGATTCGAATTCGATATGTAGCAGAAGTGAGCCTCATTTCGAAAGTAAAGCACAGGAATCTTGTTAGTTTGGTGGGATATTGTGAAGAACCTGAGCAGAGCTTGTCATGGAGATGGGTCCAAATGCTGGTTTATGAGTATGTGCCTAATGGTTCTCTGCTCGAATGCATGATGGGAAATAGAGGGAAGAGCTTAACTTGGAGGCAAAGAGTAAACGTAGCAACAGGAGCAGCTAAAGGTATAGCTTATTTGCATGAAGGGGTGACACCAAATATAATTCATCGTGACATCAAACCGAGCAACATCTTACTAGGCGAAGGGTTTGAGGCTAAAGTTTCAGATTTTGGGTTGACAAAATCAGGACCAACTAGTGATCAATCTTATGTTAGCAGCCAGATCAAAGGAACCCCAGGATACCTTGATCCCACTTATTGTTCAACCTTTCATTTGACCACTTTCAGTGACGTTTATAGTTTCGGTGTCATGCTTCTCCAGCTTATTTCTGCTAGACCGGCCGTTGATACCAAAAAAGATCAAAATATTTCTCACATTATTGATTGGGCAAGGCCTAGCTTAGAGAAGGGTAATATTGAAGAAATTATAGATGTCAATTTGCTATGTGAGCCTTGCAATATGAAGGTTATGTTGAAGATGGGTCAGCTTGCTCTCAGATGTGGGGCTCAAGTACCAAAATATCGGTCTACAATGACTCAAGTGTATCGAGATCTAGAAGAAGCTCTTTATGGAGCTGATCACTTGGCTGGCAAACTATCTTCAAAGAATTTCAGAAAATCAAGTAGCACATCTCAAGAATCAGCAGAGTCAGGGGCTTTCAAATCTATAGAAAACGATGACTATTCAAAGAGTTCTGTGAGCATAAATGGTGCTGAATTTCGAAAGTTTCATATTGATATGGATAGTTTATCCTTTCAAAGCACAAACTTAAGATGCCTAGAAAATAATAGTATTAGCATTAACACTGATGTCAATACTTTGAGGAGAATTCAAGAAGATAAGGCTACACAAAAGGCAGTAGCTTCAATGAATTTTGTGCCTGGGTCTTTGGCAACCCTTAAAAGTGTTTCTAAGAAGGATTTTTTTGCAAAACGAGACGAACTCCTCTATATATTTACTTCGTAA 1563 0.4012 MGDQHRCLLAAPSQEMAKPFHPKSSCFQTVLVWLVSGILTVMVVSLLYCLFKRLLKCKRELKALNVAGAIDDKSLKYDNISLRCFDLEALAKATNNFSSDCLLGSGALGTVYKGTFESEGTLAIKRAHGESFLAKEEFRKGQIRIRYVAEVSLISKVKHRNLVSLVGYCEEPEQSLSWRWVQMLVYEYVPNGSLLECMMGNRGKSLTWRQRVNVATGAAKGIAYLHEGVTPNIIHRDIKPSNILLGEGFEAKVSDFGLTKSGPTSDQSYVSSQIKGTPGYLDPTYCSTFHLTTFSDVYSFGVMLLQLISARPAVDTKKDQNISHIIDWARPSLEKGNIEEIIDVNLLCEPCNMKVMLKMGQLALRCGAQVPKYRSTMTQVYRDLEEALYGADHLAGKLSSKNFRKSSSTSQESAESGAFKSIENDDYSKSSVSINGAEFRKFHIDMDSLSFQSTNLRCLENNSISINTDVNTLRRIQEDKATQKAVASMNFVPGSLATLKSVSKKDFFAKRDELLYIFTS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5331g00028 520 SUPERFAMILY Protein kinase-like (PK-like) 76 385 IPR011009 -
Pral5331g00028 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Pral5331g00028 520 Gene3D Phosphorylase Kinase; domain 1 69 188 - -
Pral5331g00028 520 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 38 416 IPR047117 -
Pral5331g00028 520 SMART serkin_6 97 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5331g00028 520 Pfam Protein tyrosine and serine/threonine kinase 102 348 IPR001245 GO:0004672|GO:0006468
Pral5331g00028 520 ProSiteProfiles Protein kinase domain profile. 97 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5331g00028 520 Gene3D Transferase(Phosphotransferase) domain 1 189 403 - -
Pral5331g00028 520 CDD STKc_IRAK 103 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5331g00028 Pral-Chr5331 166128 168340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5331g00028 83 437 Receptor kinase-like Gene Family AT1G30570 37.183 3.29e-66 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral5331g00028 PK_Tyr_Ser-Thr 2.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5331g00028 - - qsa:O6P43_033569 550.821