Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5331g00020 ATGGCTGACGACGTTTCCGGCGAGAGGATCTATCTTCACGGAGATTTGGACTTGGACATTATCGAGGCCCGAATGTTGCCCAATATGGACGCTGTGTCTGAGCACTTCCGCCGTTGCGTCACTGGATGCGATACTATCAAATTCCGTTCATCCGATCCCGCTGCTGCAGCGGGCGACCGAGGCCACCGCAAAACTCACCAACATAAAAAAATCATTACCAGCGACCCTTATGTCACGGTTACTGTCCCACAGGCCACTGTTGCCCGTACACGTGTCATAAAGAATTCCCAAAACCCTTGCTGGAACGAGCACTTCAACATCCCCCTGGCACACCCCGTCATAGATTTGGAATTCCGCGTGAAAGATGACGACATTTTTGGTGCGCAACTCGTGGGAACTGTTAAAATTCCGGCGCAGGGGATTGCCTCCGGTGAACGTATTACTGGGTGGTTTCCAATTCTTGGATCCTCCGGTAAGCCACCCAAAAGCGAAACTGCGCTTTATATTGAAATGAAGTTCACGCCAGTTGAGAAGAACCCGCTGTATCTTCGCGGCATCGCGAACGATCCCGAGCACAAGGGTGTGAGACACGCGTATTTTCCGTTGCGGAAAGCTAGCTCCGTGAGACTGTACCAAGATGCCCATGTTCCTGAAGGGATGCTACCTAAGATTGAGCTAGAGGGAGGGAAGGTTTATAAGCATGAAAAATGTTGGGAAGATATTTGTTATGCTATATCTGAGGCTCATCATATGGTATATATCGTGGGCTGGTCAATCTACCACAAGGTGAAACTGATTAGGGAGCCCTCCAGACCATTGCCACGAGGTGGAGATTTAACTCTTGGTGAATTGCTCCGATACAAGTCTGAAGAAGGGGTTCGTGTTCTGTTACTGGTTTGGGATGATAAAACTTCCCACGATAAGTTGTTCTTCAAATCGGCCGGAGTGATGCAGACACATGATGAAGAAACCAAAAAGTTCTTTAAACATTCTTCCGTTATGTGTGTGTTAGCACCTCGTTATGCTAGCAGCAAGTTGAGCATTATAAAGCAACGGGTTGTTGGAACTGTCTTCACCCATCACCAAAAATGTGTTATTGTGGACACACAGGCCTCCGGTAATGATAGGAAAATAACTGCTTTTTTAGGAGGGCTTGATTTATGTGATGGCCGCTATGACACACCTGAGCATAGACTTTTTCGTGGTCTTGATACTGTATTTAAGGGGGATTTTCACAACCCTACATTTCCTGCTGGAAAGAGGGCTCCGAGGCAACCATGGCATGATTTGCACTGCAGAATTGATGGCCCTGCTGCATATGATGTTCTCATTAATTTTGAGCAGCGTTGGAGAACGGCAACTAAGTGGAAAGAGTTTGCAATGCTTGTCAAAAAGGCTTCTCACTGGCATGAGGATGCTTTAATAAAAGTAGATCGTATATCGTGGATATTAAGTCCTTCCGTGCATCCCTCAAAGGATGGTAGCACCGTCGTACCTGGAGATGACCCTACAGTGTGGGTTTCCAGCGAGGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGTTCCATTGAGTCAGGGTCCCTGAAAGGGTTTCCAAAAAATGTTCATGCTGCCCAGTCCCAGAATCTTACCTGCGCTAAAAATTTGGTAATAGATAAAAGTATTCAAACAGCATACATCCAGGCAATCAGATCTGCTCAACATTTTATTTACATAGAAAACCAATATTTTATTGGATCATCGTATGCATGGCCATCTTATAAAGATGCAGGAGCTGATAATCTTATCCCAATGGAATTGGCGCTGAAAATTGCTAATAAAATCAGAGCTAAGGAAAGATTTGCCGTGTATATTGTTTTACCAATGTGGCCAGAAGGTGATCCTAATTCCGCAACTGTGCAAGAAATTCTGTTTTGGCAGGGCCAGACATTGCAGGCGATGTATAAGGTTGTGGCTGAAGAATTGAAATCAATGCAATTTACTGACTTGCATCCACAAGATTACCTCAACTTCTATTGCCTTGGTAATCGGGAGGAATTTCATGAAGATGCCTTGAACTCAAATGGTGTTGCTGTCACCGATTCACATAAGTATGGTCGATTTATGATTTATGTGCATGCTAAGGGGATGATCATTGACGATGAGTATGTGATAGTGGGATCTGCTAATATAAACCAAAGATCTATGGCTGGTACAAAAGATACAGAGATAGCAATGGGCGCATACCAACCTCACCACACTTGGTCTGCAAGGAAAAGACATCCCTCTGGACAGATTTATGGTTACAGAATGTCACTGTGGAGTGAGCATCTTGGGCTTGAGGTCATAGACACATGTTTCAAGGAACCAGAGAGTTTGGAGTGTGTGAAGAAAGTGAATGAAATTGCTAACGAAAACTGGAGCAAGTTCACTTCTGAGAACTTCTCACAGCTGCAGGGGCATTTGCTTAAGTATCCTGTACAGGTAGATGCTGATGGGAATGTAAGCTCCCTACCCGGACATGAGAATTTCCTGGACGTTGGCGGTAGAGTACTGGGGGCCCATTCCCAGACAATTCCGGATATCCTAACAACGTAA 2580 0.4523 MADDVSGERIYLHGDLDLDIIEARMLPNMDAVSEHFRRCVTGCDTIKFRSSDPAAAAGDRGHRKTHQHKKIITSDPYVTVTVPQATVARTRVIKNSQNPCWNEHFNIPLAHPVIDLEFRVKDDDIFGAQLVGTVKIPAQGIASGERITGWFPILGSSGKPPKSETALYIEMKFTPVEKNPLYLRGIANDPEHKGVRHAYFPLRKASSVRLYQDAHVPEGMLPKIELEGGKVYKHEKCWEDICYAISEAHHMVYIVGWSIYHKVKLIREPSRPLPRGGDLTLGELLRYKSEEGVRVLLLVWDDKTSHDKLFFKSAGVMQTHDEETKKFFKHSSVMCVLAPRYASSKLSIIKQRVVGTVFTHHQKCVIVDTQASGNDRKITAFLGGLDLCDGRYDTPEHRLFRGLDTVFKGDFHNPTFPAGKRAPRQPWHDLHCRIDGPAAYDVLINFEQRWRTATKWKEFAMLVKKASHWHEDALIKVDRISWILSPSVHPSKDGSTVVPGDDPTVWVSSEDDPENWHVQIFRSIESGSLKGFPKNVHAAQSQNLTCAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIANKIRAKERFAVYIVLPMWPEGDPNSATVQEILFWQGQTLQAMYKVVAEELKSMQFTDLHPQDYLNFYCLGNREEFHEDALNSNGVAVTDSHKYGRFMIYVHAKGMIIDDEYVIVGSANINQRSMAGTKDTEIAMGAYQPHHTWSARKRHPSGQIYGYRMSLWSEHLGLEVIDTCFKEPESLECVKKVNEIANENWSKFTSENFSQLQGHLLKYPVQVDADGNVSSLPGHENFLDVGGRVLGAHSQTIPDILTT 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5331g00020 859 SMART pld_4 702 729 IPR001736 GO:0003824
Pral5331g00020 859 SMART pld_4 356 391 IPR001736 GO:0003824
Pral5331g00020 859 PANTHER PHOSPHOLIPASE D 10 847 IPR015679 -
Pral5331g00020 859 Pfam Phospholipase D C terminal 778 848 IPR024632 -
Pral5331g00020 859 Gene3D C2 domain 13 186 IPR035892 -
Pral5331g00020 859 ProSiteProfiles C2 domain profile. 1 151 IPR000008 -
Pral5331g00020 859 Pfam C2 domain 14 153 IPR000008 -
Pral5331g00020 859 FunFam Phospholipase D delta 228 472 - -
Pral5331g00020 859 Pfam PLD-like domain 561 739 IPR025202 -
Pral5331g00020 859 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 176 IPR035892 -
Pral5331g00020 859 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 356 391 IPR001736 GO:0003824
Pral5331g00020 859 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 702 729 IPR001736 GO:0003824
Pral5331g00020 859 PIRSF PLD_plant 1 859 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pral5331g00020 859 SUPERFAMILY Phospholipase D/nuclease 198 462 - -
Pral5331g00020 859 SUPERFAMILY Phospholipase D/nuclease 551 749 - -
Pral5331g00020 859 Gene3D Endonuclease Chain A 225 475 - -
Pral5331g00020 859 CDD C2_plant_PLD 9 174 - -
Pral5331g00020 859 Pfam Phospholipase D Active site motif 356 391 IPR001736 GO:0003824
Pral5331g00020 859 Gene3D Endonuclease Chain A 496 751 - -
Pral5331g00020 859 SMART C2_3c 15 150 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5331g00020 Pral-Chr5331 111093 123906 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5331g00020 1 693 Phospholipase D Gene Family (Wang group) AT4G35790 70.158 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5331g00020 K01115 - gmx:100814486 1414.05