Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5331g00018 ATGAAGTTCACGCCAGTTGAGAAGAACCCGCTGTATCTTCGCGGCATCGCGAACGATCCCGAGCACAAGGGTGTGAGACACGCGTATTTTCCGTTGCGGAAAGCTAGCTCCGTGAGACTGTACCAAGATGCCCATGTTCCTGAAGGGATGCTACCTAAGATTGAGCTAGAGGGAGGGAAGGTTTATAAGCATGAAAAATGTTGGGAAGATATTTGTTATGCTATATCTGAGGCTCATCATATGGTATATATCGTGGGCTGGTCAATCTACCACAAGGTGAAACTGATTAGGGAGCCCTCCAGACCATTGCCACGAGGTGGAGATTTAACTCTTGGTGAATTGCTCCGATACAAGTCTGAAGAAGGGGTTCGTGTTCTGTTACTGGTTTGGGATGATAAAACTTCCCACGATAAGTTGTTCTTCAAATCGGCCGGAGTGATGCAGACACATGATGAAGAAACCAAAAAGTTCTTTAAACATTCTTCCGTTATGTGTGTGTTAGCACCTCGTTATGCTAGCAGCAAGTTGAGCATTATAAAGCAACGGGTTGTTGGAACTGTCTTCACCCATCACCAAAAATGTGTTATTGTGGACACACAGGCCTCCGGTAATGATAGGAAAATAACTGCTTTTTTAGGAGGGCTTGATTTATGTGATGGCCGCTATGACACACCTGAGCATAGACTTTTTCGTGGTCTTGATACTGTATTTAAGGGGGATTTTCACAACCCTACATTTCCTGCTGGAAAGAGGGCTCCGAGGCAACCATGGCATGATTTGCACTGCAGAATTGATGGCCCTGCTGCATATGATGTTCTCATTAATTTTGAGCAGCGTTGGAGAACGGCAACTAAGTGGAAAGAGTTTGCAATGCTTGTCAAAAAGGCTTCTCACTGGCATGAGGATGCTTTAATAAAAGTAGATCGTATATCGTGGATATTAAGTCCTTCCGTGCATCCCTCAAAGGATGGTAGCACCGTCGTACCTGGAGATGACCCTACAGTGTGGGTTTCCAGCGAGGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGTTCCATTGAGTCAGGGTCCCTGAAAGGGTTTCCAAAAAATGTTCATGCTGCCCAGTCCCAGAATCTTACCTGCGCTAAAAATTTGGTAATAGATAAAAGTATTCAAACAGCATACATCCAGGCAATCAGATCTGCTCAACATTTTATTTACATAGAAAACCAATATTTTATTGGATCATCGTATGCATGGCCATCTTATAAAGATGCAGGAGCTGATAATCTTATCCCAATGGAATTGGCGCTGAAAATTGCTAATAAAATCAGAGCTAAGGAAAGATTTGCCGTGTATATTGTTTTACCAATGTGGCCAGAAGGTGATCCTAATTCCGCAACTGTGCAAGAAATTCTGTTTTGGCAGGGCCAGACATTGCAGGCGATGTATAAGGTTGTGGCTGAAGAATTGAAATCAATGCAATTTACTGACTTGCATCCACAAGATTACCTCAACTTCTATTGCCTTGGTAATCGGGAGGAATTTCATGAAGATGCCTTGAACTCAAATGGTGTTGCTGTCACCGATTCACATAAGTATGGTCGATTTATGATTTATGTGCATGCTAAGGGGATGATCATTGACGATGAGTATGTGATAGTGGGATCTGCTAATATAAACCAAAGATCTATGGCTGGTACAAAAGATACAGAGATAGCAATGGGCGCATACCAACCTCACCACACTTGGTCTGCAAGGAAAAGACATCCCTCTGGACAGATTTATGGTTACAGAATGTCACTGTGGAGTGAGCATCTTGGGCTTGAGGTCATAGACACATGTTTCAAGGAACCAGAGAGTTTGGAGTGTGTGAAGAAAGTGAATGAAATTGCTAACGAAAACTGGAGCAAGTTCACTTCTGAGAACTTCTCACAGCTGCAGGGGCATTTGCTTAAGTATCCTGTACAGGTAGATGCTGATGGGAATGTAAGCTCCCTACCCGGACATGAGAATTTCCTGGACGTTGGCGGTAGAGTACTGGGGGCCCATTCCCAGACAATTCCGGATATCCTAACAACGTAA 2070 0.4372 MKFTPVEKNPLYLRGIANDPEHKGVRHAYFPLRKASSVRLYQDAHVPEGMLPKIELEGGKVYKHEKCWEDICYAISEAHHMVYIVGWSIYHKVKLIREPSRPLPRGGDLTLGELLRYKSEEGVRVLLLVWDDKTSHDKLFFKSAGVMQTHDEETKKFFKHSSVMCVLAPRYASSKLSIIKQRVVGTVFTHHQKCVIVDTQASGNDRKITAFLGGLDLCDGRYDTPEHRLFRGLDTVFKGDFHNPTFPAGKRAPRQPWHDLHCRIDGPAAYDVLINFEQRWRTATKWKEFAMLVKKASHWHEDALIKVDRISWILSPSVHPSKDGSTVVPGDDPTVWVSSEDDPENWHVQIFRSIESGSLKGFPKNVHAAQSQNLTCAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIANKIRAKERFAVYIVLPMWPEGDPNSATVQEILFWQGQTLQAMYKVVAEELKSMQFTDLHPQDYLNFYCLGNREEFHEDALNSNGVAVTDSHKYGRFMIYVHAKGMIIDDEYVIVGSANINQRSMAGTKDTEIAMGAYQPHHTWSARKRHPSGQIYGYRMSLWSEHLGLEVIDTCFKEPESLECVKKVNEIANENWSKFTSENFSQLQGHLLKYPVQVDADGNVSSLPGHENFLDVGGRVLGAHSQTIPDILTT 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5331g00018 689 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 186 221 IPR001736 GO:0003824
Pral5331g00018 689 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 532 559 IPR001736 GO:0003824
Pral5331g00018 689 FunFam Phospholipase D delta 58 302 - -
Pral5331g00018 689 Gene3D Endonuclease Chain A 326 581 - -
Pral5331g00018 689 SUPERFAMILY Phospholipase D/nuclease 381 579 - -
Pral5331g00018 689 Gene3D Endonuclease Chain A 55 305 - -
Pral5331g00018 689 Pfam Phospholipase D Active site motif 186 221 IPR001736 GO:0003824
Pral5331g00018 689 PANTHER PHOSPHOLIPASE D 1 677 IPR015679 -
Pral5331g00018 689 PIRSF PLD_plant 1 689 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pral5331g00018 689 SUPERFAMILY Phospholipase D/nuclease 28 292 - -
Pral5331g00018 689 Pfam PLD-like domain 391 569 IPR025202 -
Pral5331g00018 689 SMART pld_4 532 559 IPR001736 GO:0003824
Pral5331g00018 689 SMART pld_4 186 221 IPR001736 GO:0003824
Pral5331g00018 689 Pfam Phospholipase D C terminal 608 678 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5331g00018 Pral-Chr5331 111093 141236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5331g00018 1 523 Phospholipase D Gene Family (Wang group) AT4G35790 73.614 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5331g00018 K01115 - gmx:100801787 1177.16